RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 MSRB1Q9NZV6 116 aa12.09□□□□□ -0.47
CPNE1-210ENST00000416778 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
CPNE1-210ENST00000416778 IGHV3-73A0A0B4J1V6 119 aa12.08□□□□□ -0.48
CPNE1-210ENST00000416778 Q6ZSN1 163 aa12.08□□□□□ -0.48
CPNE1-210ENST00000416778 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
CPNE1-210ENST00000416778 SMLR1H3BR10 107 aa12.07□□□□□ -0.48
CPNE1-210ENST00000416778 PEX7O00628 323 aa12.07□□□□□ -0.48
CPNE1-210ENST00000416778 PPT1P50897 306 aa12.07□□□□□ -0.48
CPNE1-210ENST00000416778 COX8CQ7Z4L0 72 aa12.07□□□□□ -0.48
CPNE1-210ENST00000416778 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
CPNE1-210ENST00000416778 PRADC1Q9BSG0 188 aa12.07□□□□□ -0.48
CPNE1-210ENST00000416778 MAPKAPK5-AS1Q8N8E1 139 aa12.06□□□□□ -0.48
CPNE1-210ENST00000416778 A0A087WTM6 91 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 MAP1LC3B2A6NCE7 125 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 CRYGDP07320 174 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.481e-10■■□□□ 12.2
CPNE1-210ENST00000416778 FHITP49789 147 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 RHOHQ15669 191 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 PIK3CD-AS1Q5SR53 167 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 MAP1LC3BQ9GZQ8 125 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 ZFP30Q9Y2G7 519 aa12.05□□□□□ -0.48
CPNE1-210ENST00000416778 IGHV3-38A0A0C4DH36 116 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 KRBOX1C9JBD0 128 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 EREGO14944 169 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
CPNE1-210ENST00000416778 ERVFC1-1P60608 527 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 DNLZQ5SXM8 178 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 ZFP2Q6ZN57 461 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 Q86TA4 180 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 KCNRGQ8N5I3 272 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 OR11H4Q8NGC9 324 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 ZC2HC1AQ96GY0 325 aa12.04□□□□□ -0.48
CPNE1-210ENST00000416778 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
CPNE1-210ENST00000416778 ASIPP42127 132 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 UFSP1Q6NVU6 142 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 Q8N1X5 172 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 C10orf126Q8N4M7 172 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 PARLQ9H300 379 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 JPT2Q9H910 190 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 IL36BQ9NZH7 164 aa12.03□□□□□ -0.48
CPNE1-210ENST00000416778 TRAV8-6A0A0B4J262 113 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 TRBV6-1A0A0K0K1D8 114 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 A8MWV9 139 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 B4DEV8 164 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 LGALSLQ3ZCW2 172 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-210ENST00000416778 DMRTA1Q5VZB9 504 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 STOML3Q8TAV4 291 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 MBD3L1Q8WWY6 194 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 SAMD10Q9BYL1 202 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 GTSF1LQ9H1H1 148 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 Q9UF83 564 aa12.02□□□□□ -0.49
CPNE1-210ENST00000416778 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 IBA57-AS1B1ANH7 110 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 SH2D1AO60880 128 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 ARMS2P0C7Q2 107 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 SEC11BP0C7V7 166 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 ZNF345Q14585 488 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 ZNF674Q2M3X9 581 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 LELP1Q5T871 98 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 CST9LP1Q5W188 147 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 FMC1Q96HJ9 113 aa12.01□□□□□ -0.49
CPNE1-210ENST00000416778 OR10J3Q5JRS4 329 aa12□□□□□ -0.49
CPNE1-210ENST00000416778 FAM162BQ5T6X4 162 aa12□□□□□ -0.49
CPNE1-210ENST00000416778 CDPF1Q6NVV7 123 aa12□□□□□ -0.49
CPNE1-210ENST00000416778 TCEAL7Q9BRU2 100 aa12□□□□□ -0.49
CPNE1-210ENST00000416778 SCRT2Q9NQ03 307 aa12□□□□□ -0.49
CPNE1-210ENST00000416778 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
CPNE1-210ENST00000416778 GRIFINA4D1Z8 144 aa11.99□□□□□ -0.49
CPNE1-210ENST00000416778 M0R036 132 aa11.99□□□□□ -0.49
CPNE1-210ENST00000416778 PAGE4O60829 102 aa11.99□□□□□ -0.49
CPNE1-210ENST00000416778 LTAP01374 205 aa11.99□□□□□ -0.49
CPNE1-210ENST00000416778 SFT2D1Q8WV19 159 aa11.99□□□□□ -0.49
CPNE1-210ENST00000416778 A0A0D9SG52 128 aa11.98□□□□□ -0.49
CPNE1-210ENST00000416778 LRCOL1A6NCL2 159 aa11.98□□□□□ -0.49
CPNE1-210ENST00000416778 UMAD1C9J7I0 102 aa11.98□□□□□ -0.49
CPNE1-210ENST00000416778 H3BVH4 76 aa11.98□□□□□ -0.49
CPNE1-210ENST00000416778 LINC00694P0DN24 101 aa11.98□□□□□ -0.49
CPNE1-210ENST00000416778 UBE2G1P62253 170 aa11.98□□□□□ -0.49
CPNE1-210ENST00000416778 C14orf178Q8N769 122 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-210ENST00000416778 GAGE12JA6NER3 117 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 XGP55808 180 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 KRTAP10-1P60331 282 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 GAGE1Q13065 139 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 GAGE4Q13068 117 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 GAGE5Q13069 117 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 LINC01559Q495D7 138 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 GAGE13Q4V321 117 aa11.97□□□□□ -0.49
CPNE1-210ENST00000416778 IGHV3-30P01768 117 aa11.96□□□□□ -0.49
CPNE1-210ENST00000416778 IGHV3-33P01772 117 aa11.96□□□□□ -0.49
CPNE1-210ENST00000416778 IGHV3-30-3P0DP02 117 aa11.96□□□□□ -0.49
CPNE1-210ENST00000416778 IGHV3-30-5P0DP03 117 aa11.96□□□□□ -0.49
CPNE1-210ENST00000416778 SYT8Q8NBV8 401 aa11.96□□□□□ -0.49
CPNE1-210ENST00000416778 FAM213BQ8TBF2 198 aa11.96□□□□□ -0.49
CPNE1-210ENST00000416778 SFRP2Q96HF1 295 aa11.96□□□□□ -0.49
CPNE1-210ENST00000416778 TMSB15BA0A087X1C1 80 aa11.95□□□□□ -0.5
CPNE1-210ENST00000416778 S100A9P06702 114 aaKnown RBP11.95□□□□□ -0.5
CPNE1-210ENST00000416778 ZNF471Q9BX82 626 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-210ENST00000416778 BCL2L11O43521 198 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms