RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 KHDC1LQ5JSQ8 128 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 BVES-AS1Q5T3Y7 98 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 DEFB104AQ8WTQ1 72 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 FAM19A4Q96LR4 140 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 ZNF580Q9UK33 172 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 DEFB136Q30KP8 78 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 DPF1Q92782 380 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 ZNF702PQ9H963 129 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 MXRA5Q9NR99 2828 aa7.47□□□□□ -1.21
LINC00494-201ENST00000416742 CBY3A6NI87 242 aa7.46□□□□□ -1.21
LINC00494-201ENST00000416742 LGALS1P09382 135 aaKnown RBP7.46□□□□□ -1.21
LINC00494-201ENST00000416742 HOXD3P31249 432 aaPredicted RBP7.46□□□□□ -1.21
LINC00494-201ENST00000416742 SNRPD3P62318 126 aaKnown RBP7.46□□□□□ -1.21
LINC00494-201ENST00000416742 HIST2H2BDQ6DRA6 164 aa7.46□□□□□ -1.21
LINC00494-201ENST00000416742 MRAP2Q96G30 205 aa7.46□□□□□ -1.21
LINC00494-201ENST00000416742 JPT2Q9H910 190 aa7.46□□□□□ -1.22
LINC00494-201ENST00000416742 TMEM160Q9NX00 188 aa7.46□□□□□ -1.22
LINC00494-201ENST00000416742 ELANEP08246 267 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 ODF1Q14990 250 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 C18orf65Q6ZTR6 163 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 C2orf91Q6ZV80 131 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 RASL10AQ92737 203 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 SMIM2Q9BVW6 85 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 COX11Q9Y6N1 276 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 CR1P17927 2039 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 TMEM89A2RUT3 159 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 F5H697 171 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 ATP5LO75964 103 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 SUMO2P61956 95 aaKnown RBP7.45□□□□□ -1.22
LINC00494-201ENST00000416742 OR1N2Q8NGR9 330 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 AP1S3Q96PC3 154 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 DUX3Q96PT4 197 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 MUC4Q99102 2169 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 LINC01546A6NGU7 62 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 KLLNB2CW77 178 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 GAGE1Q13065 139 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 SPINK13Q1W4C9 94 aa7.45□□□□□ -1.22
LINC00494-201ENST00000416742 UBR5O95071 2799 aaPredicted RBP7.45□□□□□ -1.22
LINC00494-201ENST00000416742 A0A087WWL8 130 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 IGKCP01834 107 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 PTTG1IPP53801 180 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 SLURP1P55000 103 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 SAMD13Q5VXD3 122 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 GTSCR1Q86UQ5 136 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 APRG1Q8IVJ8 170 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 TRBV7-9A0A0J9YWB2 115 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 FSHBP01225 129 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 VAMP3Q15836 100 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 ZNF124Q15973 351 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 TCTEX1D4Q5JR98 221 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 UBE2E2Q96LR5 201 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 TTTY13Q9BZ97 58 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 A0A0J9YX75 114 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 K7EQG2 157 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 FGF6P10767 208 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 TMEM97Q5BJF2 176 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 HIST2H2BCQ6DN03 193 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 ORAOV1Q8WV07 137 aa7.44□□□□□ -1.22
LINC00494-201ENST00000416742 MRPL35Q9NZE8 188 aaKnown RBP7.44□□□□□ -1.22
LINC00494-201ENST00000416742 FAM74A4Q5TZK3 123 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 DPM2O94777 84 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 MED14OSP0DP75 135 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 HTN1P15515 57 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 ZC2HC1BQ5TFG8 222 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 BOD1L2Q8IYS8 172 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 WNK1Q9H4A3 2382 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.43□□□□□ -1.22
LINC00494-201ENST00000416742 CSTL1Q9H114 145 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 MDFICQ9P1T7 246 aa7.43□□□□□ -1.22
LINC00494-201ENST00000416742 IGKV2D-26A0A0A0MRZ7 120 aa7.42□□□□□ -1.22
LINC00494-201ENST00000416742 TAX1BP3O14907 124 aa7.42□□□□□ -1.22
LINC00494-201ENST00000416742 ORMDL2Q53FV1 153 aa7.42□□□□□ -1.22
LINC00494-201ENST00000416742 KNCNA6PVL3 124 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 DEFB125Q8N687 156 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 OR11H1Q8NG94 326 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 C20orf78Q9BR46 151 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 HHLA3Q9XRX5 114 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 SETD2Q9BYW2 2564 aaPredicted RBP7.41□□□□□ -1.22
LINC00494-201ENST00000416742 LGALS9O00182 355 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 CCL25O15444 150 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 CDKN1BP46527 198 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 DEFB131AP59861 70 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 LRRC75A-AS1Q8N1F1 130 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 C11orf44Q8N8P7 122 aa7.41□□□□□ -1.22
LINC00494-201ENST00000416742 APCP25054 2843 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 C2orf66Q6UXQ4 117 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 Q8N1Y9 231 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 WFDC11Q8NEX6 87 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 ZMAT4Q9H898 229 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 A0A087WX48 190 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 DUSP14O95147 198 aaKnown RBP7.4□□□□□ -1.22
LINC00494-201ENST00000416742 ADAMTSL5Q6ZMM2 481 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 OR9G4Q8NGQ1 327 aa7.4□□□□□ -1.22
LINC00494-201ENST00000416742 IGHV1OR15-1A0A075B7D0 117 aa7.4□□□□□ -1.23
LINC00494-201ENST00000416742 TRAV8-6A0A0B4J262 113 aa7.4□□□□□ -1.23
LINC00494-201ENST00000416742 UBE2V1Q13404 147 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms