RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ADAMTSL5Q6ZMM2 481 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 H3BMM0 161 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 UBE2WQ96B02 151 aa8.28□□□□□ -1.08
COL12A1-203ENST00000416123 RHOHQ15669 191 aa8.27□□□□□ -1.08
COL12A1-203ENST00000416123 OVOL2Q9BRP0 275 aa8.27□□□□□ -1.08
COL12A1-203ENST00000416123 PTPN13Q12923 2485 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 C8orf31Q8N9H6 132 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 FAM231BA6NCW3 169 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 I3L2K1 104 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 K7EIM0 57 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 SMIM2Q9BVW6 85 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 HIST2H2BDQ6DRA6 164 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 RMI2Q96E14 147 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 PYGO2Q9BRQ0 406 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 NDUFA12Q9UI09 145 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 ZFAND6Q6FIF0 208 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 UBE2BP63146 152 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 C5orf38Q86SI9 138 aa8.27□□□□□ -1.09
COL12A1-203ENST00000416123 Q6ZWC4 215 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 E7EUB6 86 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 TRBV12-3P01733 135 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 PRR20EP86478 221 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 PRR20CP86479 221 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 PRR20DP86480 221 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 PRR20BP86481 221 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 PRR20AP86496 221 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 Q8N7P7 452 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 C19orf84I3L1E1 186 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 TAL2Q16559 108 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 POU2AF1Q16633 256 aa8.26□□□□□ -1.09
COL12A1-203ENST00000416123 IGLV11-55A0A075B6I3 123 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 K7ERJ3 54 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 BUB3O43684 328 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
COL12A1-203ENST00000416123 FGF6P10767 208 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 GAGE2BQ13066 116 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 PRORYQ9H606 182 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 TRAV12-1A0A0B4J245 112 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 CRLF1O75462 422 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 HERVK_113P63121 156 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 DEFB135Q30KP9 77 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 MAJINQ3KP22 176 aa8.25□□□□□ -1.09
COL12A1-203ENST00000416123 PROP1O75360 226 aa8.24□□□□□ -1.09
COL12A1-203ENST00000416123 SPG11Q96JI7 2443 aa8.24□□□□□ -1.09
COL12A1-203ENST00000416123 FAM231DQ6ZW35 169 aa8.24□□□□□ -1.09
COL12A1-203ENST00000416123 C16orf74Q96GX8 76 aa8.24□□□□□ -1.09
COL12A1-203ENST00000416123 RBMY1FQ15415 496 aaKnown RBP8.24□□□□□ -1.09
COL12A1-203ENST00000416123 MSMPQ1L6U9 139 aa8.24□□□□□ -1.09
COL12A1-203ENST00000416123 CTSGP08311 255 aa8.24□□□□□ -1.09
COL12A1-203ENST00000416123 C16orf54Q6UWD8 224 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 Q8NFD4 153 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 CEND1Q8N111 149 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 SPRY4Q9C004 299 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 F8VRH5 84 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 DNAJC9-AS1A6NH13 148 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 SPART-AS1P0CW21 52 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 ODF3L1Q8IXM7 274 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 RBAKDNA6NC62 111 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 PRAC2D3DTV9 90 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 K7EQD1 137 aa8.23□□□□□ -1.09
COL12A1-203ENST00000416123 CSPG4Q6UVK1 2322 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 RNF138Q8WVD3 245 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 DSCR8Q96T75 97 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 C1orf43Q9BWL3 253 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 COX11Q9Y6N1 276 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 ICOSQ9Y6W8 199 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 DAZAP2Q15038 168 aaPredicted RBP8.22□□□□□ -1.09
COL12A1-203ENST00000416123 J3QQQ9 107 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 C4orf3Q8WVX3 66 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 Q8N1Y9 231 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 HHLA3Q9XRX5 114 aa8.22□□□□□ -1.09
COL12A1-203ENST00000416123 CRYGCP07315 174 aa8.21□□□□□ -1.09
COL12A1-203ENST00000416123 IGLL1P15814 213 aa8.21□□□□□ -1.09
COL12A1-203ENST00000416123 AMTNQ6UX39 209 aa8.21□□□□□ -1.09
COL12A1-203ENST00000416123 SOCS3O14543 225 aa8.21□□□□□ -1.09
COL12A1-203ENST00000416123 UBE2V1Q13404 147 aa8.21□□□□□ -1.09
COL12A1-203ENST00000416123 MSRB1Q9NZV6 116 aa8.21□□□□□ -1.09
COL12A1-203ENST00000416123 C20orf78Q9BR46 151 aa8.21□□□□□ -1.09
COL12A1-203ENST00000416123 TEX22C9J3V5 150 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 CCL18P55774 89 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 SRSF2Q01130 221 aaKnown RBP8.21□□□□□ -1.1
COL12A1-203ENST00000416123 Q9H8V8 135 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 CD5LO43866 347 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 IGKV1-17P01599 117 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 IGLV2-14P01704 120 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 LGALS9BQ3B8N2 356 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 LGALS9CQ6DKI2 356 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 MUC22E2RYF6 1773 aaPredicted RBP8.21□□□□□ -1.1
COL12A1-203ENST00000416123 hADV29S1A0JD25 119 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 UNQ9165/PRO28630Q6UXU0 137 aa8.21□□□□□ -1.1
COL12A1-203ENST00000416123 SORL1Q92673 2214 aa8.2□□□□□ -1.1
COL12A1-203ENST00000416123 DLEU1O43261 78 aa8.2□□□□□ -1.1
COL12A1-203ENST00000416123 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
COL12A1-203ENST00000416123 TTC28Q96AY4 2481 aa8.2□□□□□ -1.1
COL12A1-203ENST00000416123 PATE2Q6UY27 113 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms