RNA–Protein interactions for RNA: ENST00000415569.5

GTDC1-208, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5

Gene GTDC1, Length 2,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-208ENST00000415569 ZNF688P0C7X2 276 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 C3orf79P0CE67 100 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 PMCHP20382 165 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 AMTP48728 403 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 TWIST1Q15672 202 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 ANXA2RQ3ZCQ2 193 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 PSMG4Q5JS54 123 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 KIR2DL5AQ8N109 375 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 KLHL30-AS1Q8NEE0 82 aa3.28□□□□□ -1.89
GTDC1-208ENST00000415569 SORL1Q92673 2214 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 IGLV2-18A0A075B6J9 118 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RBMY1BA6NDE4 496 aaKnown RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RBMY1EA6NEQ0 496 aaKnown RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 SMKR1H3BMG3 65 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 H3BVH4 76 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 NPYP01303 97 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RBMY1DP0C7P1 496 aaKnown RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 LINC00614P0C842 121 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RNASE4P34096 147 aaKnown RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 KRTAP10-3P60369 221 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 PMCHL1Q16048 86 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 TDRG1Q3Y452 100 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RNASEKQ6P5S7 137 aaKnown RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 LINC00173Q6ZV60 143 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 DEFB125Q8N687 156 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 POM121L12Q8N7R1 296 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 BORCS7Q96B45 105 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 SAMD10Q9BYL1 202 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 SIGLEC8Q9NYZ4 499 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 ZNF256Q9Y2P7 627 aaPredicted RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 CRXO43186 299 aaPredicted RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 GNRH2O43555 120 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 SCGB1D1O95968 90 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RBMY1A1P0DJD3 496 aaKnown RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RBMY1CP0DJD4 496 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 TFPI2P48307 235 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 PROK1P58294 105 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 PKIAP61925 76 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 CACNG7P62955 275 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 RBMY1FQ15415 496 aaKnown RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 DEFB114Q30KQ6 69 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 FOXI2Q6ZQN5 318 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 TMEM61Q8N0U2 210 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 ORMDL3Q8N138 153 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 NRACQ8N912 160 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 PRELID3AQ96N28 172 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 CITED2Q99967 270 aaPredicted RBP3.27□□□□□ -1.89
GTDC1-208ENST00000415569 TRRAPQ9Y4A5 3859 aa3.27□□□□□ -1.89
GTDC1-208ENST00000415569 FN1P02751 2386 aaKnown RBP3.26□□□□□ -1.89
GTDC1-208ENST00000415569 C7orf71A4D174 169 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 HSBP1L1C9JCN9 74 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 M0R2Z0 102 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 SPRY2O43597 315 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 HSBP1O75506 76 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 NCR2O95944 276 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 GATA1P15976 413 aaPredicted RBP3.26□□□□□ -1.89
GTDC1-208ENST00000415569 EVI2AP22794 236 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 IFI27P40305 119 aaPredicted RBP3.26□□□□□ -1.89
GTDC1-208ENST00000415569 LEPP41159 167 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 LINC00315P59091 139 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 SNRPD3P62318 126 aaKnown RBP3.26□□□□□ -1.89
GTDC1-208ENST00000415569 PEMTQ9UBM1 199 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 KIF25-AS1Q9Y6Z4 181 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 HIVEP2P31629 2446 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 HLA-DRB4P13762 266 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 C9orf85Q96MD7 179 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 PRO1933Q9H354 126 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 MAP6D1Q9H9H5 199 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 TSSC4Q9Y5U2 329 aaPredicted RBP3.26□□□□□ -1.89
GTDC1-208ENST00000415569 HLA-DRB4X5D2U9 266 aa3.26□□□□□ -1.89
GTDC1-208ENST00000415569 NOTCH2Q04721 2471 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 TRAV12-3A0A0B4J271 114 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 IGHV3-16A0A0C4DH30 117 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 KNCNA6PVL3 124 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 H3BMM0 161 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 CCL24O00175 119 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 DUSP14O95147 198 aaKnown RBP3.25□□□□□ -1.89
GTDC1-208ENST00000415569 PPBPP02775 128 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 ASIPP42127 132 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 KRTDAPP60985 99 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 SCGB2A2Q13296 93 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 CD300EQ496F6 205 aaPredicted RBP3.25□□□□□ -1.89
GTDC1-208ENST00000415569 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 C11orf44Q8N8P7 122 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 DPF1Q92782 380 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 C20orf144Q9BQM9 153 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 LAMTOR2Q9Y2Q5 125 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 NACAE9PAV3 2078 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 TRAV12-2A0A075B6T6 113 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 TCF21O43680 179 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 TNFRSF6BO95407 300 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 CKS2P33552 79 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 CDKN1BP46527 198 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 ODF3L2Q3SX64 289 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 KHDC1LQ5JSQ8 128 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 ZNF418Q8TF45 676 aaPredicted RBP3.25□□□□□ -1.89
GTDC1-208ENST00000415569 ANK2Q01484 3957 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 WNK1Q9H4A3 2382 aa3.25□□□□□ -1.89
GTDC1-208ENST00000415569 TRAV26-2A0A0B4J265 109 aa3.24□□□□□ -1.89
GTDC1-208ENST00000415569 TRAV25A0A0B4J276 109 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms