RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 NACAE9PAV3 2078 aa4.87□□□□□ -1.63
LINC00343-201ENST00000414368 MUC4Q99102 2169 aa4.87□□□□□ -1.63
LINC00343-201ENST00000414368 IGHV1OR15-1A0A075B7D0 117 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 FBLL1A6NHQ2 334 aaKnown RBP4.86□□□□□ -1.63
LINC00343-201ENST00000414368 GNRH2O43555 120 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 LTAP01374 205 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 TWIST1Q15672 202 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 C12orf74Q32Q52 190 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 ZNF506Q5JVG8 444 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 SAPCD1Q5SSQ6 148 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 BAGE2Q86Y30 109 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 EIF4E3Q8N5X7 224 aaKnown RBP4.86□□□□□ -1.63
LINC00343-201ENST00000414368 MUC7Q8TAX7 377 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
LINC00343-201ENST00000414368 C11orf52Q96A22 123 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 ZC2HC1AQ96GY0 325 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 EIF5A2Q9GZV4 153 aaKnown RBP4.86□□□□□ -1.63
LINC00343-201ENST00000414368 NOP10Q9NPE3 64 aaKnown RBP4.86□□□□□ -1.63
LINC00343-201ENST00000414368 GSN-AS1Q9NRJ2 163 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 MED9Q9NWA0 146 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 ZFP30Q9Y2G7 519 aa4.86□□□□□ -1.63
LINC00343-201ENST00000414368 TRAV21A0A0B4J279 112 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 TRBV6-1A0A0K0K1D8 114 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 TMEM189A5PLL7 270 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 PDE6DO43924 150 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 S100A9P06702 114 aaKnown RBP4.85□□□□□ -1.63
LINC00343-201ENST00000414368 PFN1P07737 140 aaKnown RBP4.85□□□□□ -1.63
LINC00343-201ENST00000414368 SPART-AS1P0CW21 52 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 DEFB130BP0DP73 79 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 DEFB130AP0DP74 79 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 TAGLN2P37802 199 aaKnown RBP4.85□□□□□ -1.63
LINC00343-201ENST00000414368 CEBPGP53567 150 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 CENPWQ5EE01 88 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 FAM159AQ6UWV7 190 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 ZNF493Q6ZR52 646 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 Q6ZTC4 211 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 TMEM183AQ8IXX5 376 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 C11orf72Q8NBR9 251 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 TMEM263Q8WUH6 116 aaKnown RBP4.85□□□□□ -1.63
LINC00343-201ENST00000414368 C16orf74Q96GX8 76 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 FAM210AQ96ND0 272 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 TXNDC17Q9BRA2 123 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 LINC00467Q9BRT7 94 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 MDFICQ9P1T7 246 aa4.85□□□□□ -1.63
LINC00343-201ENST00000414368 DYNC2H1Q8NCM8 4307 aaKnown RBP4.85□□□□□ -1.63
LINC00343-201ENST00000414368 STARD9Q9P2P6 4700 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 TRBV20OR9-2A0A075B6H5 130 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 IGKV3D-20A0A0C4DH25 116 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 FABP5P3A8MUU1 101 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 SNURFLB1AK76 121 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 C9JQL5 133 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 M0R036 132 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 SH2D1AO60880 128 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 IGLV2-8P01709 118 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 ORM1P02763 201 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 TYMSP04818 313 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 ZNF674Q2M3X9 581 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 TDRG1Q3Y452 100 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 PRR27Q6MZM9 219 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 Q6ZTI0 123 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 COX8CQ7Z4L0 72 aa4.84□□□□□ -1.63
LINC00343-201ENST00000414368 TIMM8BQ9Y5J9 83 aaPredicted RBP4.84□□□□□ -1.63
LINC00343-201ENST00000414368 PLECQ15149 4684 aaKnown RBP4.83□□□□□ -1.64
LINC00343-201ENST00000414368 TMSB15BA0A087X1C1 80 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 IGHV3-16A0A0C4DH30 117 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 LYRM9A8MSI8 78 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 GAGE7O76087 117 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 SRP19P09132 144 aaKnown RBP4.83□□□□□ -1.64
LINC00343-201ENST00000414368 GAGE12FP0CL80 117 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 GAGE12GP0CL81 117 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 GAGE12IP0CL82 117 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 MGST1P10620 155 aaKnown RBP4.83□□□□□ -1.64
LINC00343-201ENST00000414368 GNG4P50150 75 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 TCL1AP56279 114 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 RAB14P61106 215 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 DAD1P61803 113 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 DAZ2Q13117 558 aaKnown RBP4.83□□□□□ -1.64
LINC00343-201ENST00000414368 OR5I1Q13606 314 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 CASC10Q5T4H9 136 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 FAM162BQ5T6X4 162 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 OCC1Q8TAD7 63 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 PHLDA1Q8WV24 401 aaPredicted RBP4.83□□□□□ -1.64
LINC00343-201ENST00000414368 URB1-AS1Q96HZ7 61 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 PARLQ9H300 379 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 SDF2L1Q9HCN8 221 aa4.83□□□□□ -1.64
LINC00343-201ENST00000414368 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
LINC00343-201ENST00000414368 TRGV1A0A0A0MS02 117 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 GRIFINA4D1Z8 144 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 B4DEV8 164 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 KRBOX1C9JBD0 128 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 TMEM250H0YL14 139 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 C3orf84H3BNL1 204 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 K7EN84 100 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 SPINK4O60575 86 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 HTN3P15516 51 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 RPL19P84098 196 aaKnown RBP4.82□□□□□ -1.64
LINC00343-201ENST00000414368 ZNF415Q09FC8 603 aa4.82□□□□□ -1.64
LINC00343-201ENST00000414368 CEMP1Q6PRD7 247 aaPredicted RBP4.82□□□□□ -1.64
LINC00343-201ENST00000414368 KCNS1Q96KK3 526 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms