RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ORMDL3Q8N138 153 aa12.72□□□□□ -0.37
PTPRC-206ENST00000413409 LINC00482Q8N8I6 264 aa12.72□□□□□ -0.37
PTPRC-206ENST00000413409 IGKV3-7A0A075B6H7 116 aa12.71□□□□□ -0.37
PTPRC-206ENST00000413409 LINC00587B1AMM8 73 aa12.71□□□□□ -0.37
PTPRC-206ENST00000413409 M0R2Z0 102 aa12.71□□□□□ -0.37
PTPRC-206ENST00000413409 NTF3P20783 257 aa12.71□□□□□ -0.37
PTPRC-206ENST00000413409 SNRPD3P62318 126 aaKnown RBP12.71□□□□□ -0.37
PTPRC-206ENST00000413409 TRAV2A0A0B4J234 112 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 KLLNB2CW77 178 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 PPBPP02775 128 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 LINC00614P0C842 121 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 MRPL51Q4U2R6 128 aaKnown RBP12.7□□□□□ -0.38
PTPRC-206ENST00000413409 AMN1Q8IY45 258 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 DPF1Q92782 380 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 PEMTQ9UBM1 199 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 FRAS1Q86XX4 4008 aa12.7□□□□□ -0.38
PTPRC-206ENST00000413409 KIR2DL5BA0A0G2JN68 375 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 KIR2DL5BA0A0G2JPC4 375 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 D6R8Y8 96 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 F6UB75 175 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 LEPP41159 167 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 KRTDAPP60985 99 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 ZFAND6Q6FIF0 208 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 ADAMTSL5Q6ZMM2 481 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 KIR2DL5AQ8N109 375 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 Q8N976 141 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 PRELID3AQ96N28 172 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 LAMTOR2Q9Y2Q5 125 aa12.69□□□□□ -0.38
PTPRC-206ENST00000413409 IGHV1-24A0A0C4DH33 117 aa12.68□□□□□ -0.38
PTPRC-206ENST00000413409 C3orf79P0CE67 100 aa12.68□□□□□ -0.38
PTPRC-206ENST00000413409 SLURP1P55000 103 aa12.68□□□□□ -0.38
PTPRC-206ENST00000413409 DEFB1P60022 68 aa12.68□□□□□ -0.38
PTPRC-206ENST00000413409 ZNF664Q8N3J9 261 aa12.68□□□□□ -0.38
PTPRC-206ENST00000413409 A0A0J9YX75 114 aa12.67□□□□□ -0.38
PTPRC-206ENST00000413409 DUSP14O95147 198 aaKnown RBP12.67□□□□□ -0.38
PTPRC-206ENST00000413409 C18orf65Q6ZTR6 163 aa12.67□□□□□ -0.38
PTPRC-206ENST00000413409 OR1N2Q8NGR9 330 aa12.67□□□□□ -0.38
PTPRC-206ENST00000413409 RNF185Q96GF1 192 aa12.67□□□□□ -0.38
PTPRC-206ENST00000413409 TSSC4Q9Y5U2 329 aaPredicted RBP12.67□□□□□ -0.38
PTPRC-206ENST00000413409 MUC21A0A0G2JKD1 596 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 MUC21A0A140T8X8 626 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 ASIPP42127 132 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 PSMG4Q5JS54 123 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 MUC21Q5SSG8 566 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 FA2HQ7L5A8 372 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 SMIM15Q7Z3B0 74 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 WFDC3Q8IUB2 231 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 KLHL30-AS1Q8NEE0 82 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 OR10AG1Q8NH19 301 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 AP5S1Q9NUS5 200 aa12.66□□□□□ -0.38
PTPRC-206ENST00000413409 H3BVH4 76 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 DDTP30046 118 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 CKS2P33552 79 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 KHDC1LQ5JSQ8 128 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 FOXI2Q6ZQN5 318 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 OR11H1Q8NG94 326 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 OR9G4Q8NGQ1 327 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 PRO1933Q9H354 126 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 SCRT2Q9NQ03 307 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 MSRB1Q9NZV6 116 aa12.65□□□□□ -0.38
PTPRC-206ENST00000413409 BTF3P20290 206 aaKnown RBP12.64□□□□□ -0.39
PTPRC-206ENST00000413409 RNASE4P34096 147 aaKnown RBP12.64□□□□□ -0.39
PTPRC-206ENST00000413409 TFPI2P48307 235 aa12.64□□□□□ -0.39
PTPRC-206ENST00000413409 ANXA2RQ3ZCQ2 193 aa12.64□□□□□ -0.39
PTPRC-206ENST00000413409 EBLN2Q6P2I7 272 aa12.64□□□□□ -0.39
PTPRC-206ENST00000413409 C7orf71A4D174 169 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 J3KRW8 73 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 NXPH4O95158 308 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 TSPOP30536 169 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 FHL3Q13643 280 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 SPANXN1Q5VSR9 72 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 Q6ZQT7 251 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 PRSS3P2Q8NHM4 247 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 C20orf144Q9BQM9 153 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 VAMP8Q9BV40 100 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 SELENOKQ9Y6D0 94 aa12.63□□□□□ -0.39
PTPRC-206ENST00000413409 A8MTW9 85 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 LEPROTL1O95214 131 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 NPYP01303 97 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 CSN3P07498 182 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 SSTP61278 116 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 PMCHL1Q16048 86 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 TMEM70Q9BUB7 260 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 MAP1LC3AQ9H492 121 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 LINC01546A6NGU7 62 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 CRXO43186 299 aaPredicted RBP12.62□□□□□ -0.39
PTPRC-206ENST00000413409 S100A4P26447 101 aaKnown RBP12.62□□□□□ -0.39
PTPRC-206ENST00000413409 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
PTPRC-206ENST00000413409 NCR2O95944 276 aa12.61□□□□□ -0.39
PTPRC-206ENST00000413409 SBSPONQ8IVN8 264 aa12.61□□□□□ -0.39
PTPRC-206ENST00000413409 DEFB125Q8N687 156 aa12.61□□□□□ -0.39
PTPRC-206ENST00000413409 DLX4Q92988 240 aaPredicted RBP12.61□□□□□ -0.39
PTPRC-206ENST00000413409 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
PTPRC-206ENST00000413409 MCRIP2Q9BUT9 160 aaKnown RBP12.61□□□□□ -0.39
PTPRC-206ENST00000413409 C20orf202A1L168 122 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms