RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 SNRPD3P62318 126 aaKnown RBP8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 Q6YL49 198 aa8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 ODF3Q96PU9 254 aa8.61□□□□□ -1.03
TRAFD1-202ENST00000412615 A6NDN8 102 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 CBY3A6NI87 242 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 FSHBP01225 129 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 LGALS1P09382 135 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 TMEM160Q9NX00 188 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 FLNCQ14315 2725 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 A0A087WX48 190 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 LGALS9O00182 355 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 ZNF688P0C7X2 276 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 ZC2HC1BQ5TFG8 222 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 ADAMTSL5Q6ZMM2 481 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 POM121L12Q8N7R1 296 aa8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 MRPL35Q9NZE8 188 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-202ENST00000412615 IGHV4-31P0DP07 118 aa8.59□□□□□ -1.03
TRAFD1-202ENST00000412615 TRAV12-3A0A0B4J271 114 aa8.59□□□□□ -1.03
TRAFD1-202ENST00000412615 K7EQG2 157 aa8.59□□□□□ -1.03
TRAFD1-202ENST00000412615 SYNJ2BPP57105 145 aa8.59□□□□□ -1.03
TRAFD1-202ENST00000412615 OR4C5Q8NGB2 326 aa8.59□□□□□ -1.03
TRAFD1-202ENST00000412615 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
TRAFD1-202ENST00000412615 UBE2E2Q96LR5 201 aa8.59□□□□□ -1.03
TRAFD1-202ENST00000412615 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 A0A0J9YX75 114 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 CD7P09564 240 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 GTSCR1Q86UQ5 136 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 BBC3Q96PG8 261 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 SCGB3A1Q96QR1 104 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 ZNF702PQ9H963 129 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 KIF25-AS1Q9Y6Z4 181 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 CSPG4Q6UVK1 2322 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 PLNP26678 52 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 ERASQ7Z444 233 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
TRAFD1-202ENST00000412615 H7C1H1 209 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 HLA-DRB4P13762 266 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 BEX4Q9NWD9 120 aaPredicted RBP8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 HLA-DRB4X5D2U9 266 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 ACACBO00763 2458 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 IGHV4OR15-8A0A075B7B6 117 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 A0A087WW49 117 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 F8VRH5 84 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 H3BRM9 83 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 HOXA3O43365 443 aaPredicted RBP8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 LINC00315P59091 139 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 AMMECR1LQ6DCA0 310 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 ZNF843Q8N446 348 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 DUSP14O95147 198 aaKnown RBP8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 HOXD3P31249 432 aaPredicted RBP8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 DEFB113Q30KQ7 82 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 RNF152Q8N8N0 203 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 CSTL1Q9H114 145 aa8.57□□□□□ -1.04
TRAFD1-202ENST00000412615 RPL32P62910 135 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-202ENST00000412615 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
TRAFD1-202ENST00000412615 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
TRAFD1-202ENST00000412615 IGKV3-20P01619 116 aa8.56□□□□□ -1.04
TRAFD1-202ENST00000412615 CDKN1BP46527 198 aa8.56□□□□□ -1.04
TRAFD1-202ENST00000412615 MAP1AP78559 2803 aaPredicted RBP8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 LINC01549A6NIU2 74 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 KRTAP10-9P60411 292 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 Q5PR19 223 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 SYT8Q8NBV8 401 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 NEXN-AS1Q8NBZ9 246 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 DUX5Q96PT3 197 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 MYO18BQ8IUG5 2567 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 TRAV8-6A0A0B4J262 113 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 IGHV3-16A0A0C4DH30 117 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 C9orf85Q96MD7 179 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
TRAFD1-202ENST00000412615 TRBV25-1A0A075B6N4 114 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 IGHV1OR15-1A0A075B7D0 117 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 F5H697 171 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 CHAC1Q9BUX1 264 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 JPT2Q9H910 190 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 CRYBG3Q68DQ2 2970 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 K7EP13 123 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 VCYO14598 125 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 SPINK13Q1W4C9 94 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 TCTEX1D4Q5JR98 221 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 SUMO4Q6EEV6 95 aa8.54□□□□□ -1.04
TRAFD1-202ENST00000412615 A0A087WWL8 130 aa8.53□□□□□ -1.04
TRAFD1-202ENST00000412615 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-202ENST00000412615 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
TRAFD1-202ENST00000412615 MDFICQ9P1T7 246 aa8.53□□□□□ -1.04
TRAFD1-202ENST00000412615 CYSLTR1Q9Y271 337 aa8.53□□□□□ -1.04
TRAFD1-202ENST00000412615 Q8N1Y9 231 aa8.53□□□□□ -1.04
TRAFD1-202ENST00000412615 KIR2DL4Q99706 377 aa8.53□□□□□ -1.04
TRAFD1-202ENST00000412615 MUC4Q99102 2169 aa8.52□□□□□ -1.04
TRAFD1-202ENST00000412615 UTP20O75691 2785 aaKnown RBP8.52□□□□□ -1.05
TRAFD1-202ENST00000412615 GCSHP23434 173 aa8.52□□□□□ -1.05
TRAFD1-202ENST00000412615 Q8N2B8 174 aa8.52□□□□□ -1.05
TRAFD1-202ENST00000412615 ANKRD17O75179 2603 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms