RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 CCDC179H3BU77 68 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 NCR2O95944 276 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 TFF1P04155 84 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 SLC25A6P12236 298 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 CTAGE3PQ8IX95 158 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 TMEM141Q96I45 108 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 BET1LQ9NYM9 111 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 FER1L6Q2WGJ9 1857 aa0.48□□□□□ -2.33
CLHC1-205ENST00000411884 CDK12Q9NYV4 1490 aaPredicted RBP0.48□□□□□ -2.33
CLHC1-205ENST00000411884 CTTNBP2Q8WZ74 1663 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 TANC2Q9HCD6 1990 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 TRAV12-2A0A075B6T6 113 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 ZNF670-ZNF695F2Z2N8 137 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 K7ERU9 68 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 LINC00694P0DN24 101 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 COX4I1P13073 169 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 SMIM21Q3B7S5 101 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 OR2T2Q6IF00 324 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 TSTD1Q8NFU3 115 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 FHAD1B1AJZ9 1412 aa0.47□□□□□ -2.33
CLHC1-205ENST00000411884 BLMP54132 1417 aaPredicted RBP0.47□□□□□ -2.33
CLHC1-205ENST00000411884 WDR97A6NE52 1622 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 ZDBF2Q9HCK1 2354 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 FAM236AA0A1B0GUQ0 79 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 FAM236BA0A1B0GV22 79 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 TCRBV3S1A0A5B6 114 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 DSCR8Q96T75 97 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 FAM103A1Q9BTL3 118 aaKnown RBP0.46□□□□□ -2.34
CLHC1-205ENST00000411884 PLAC8Q9NZF1 115 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 FANCMQ8IYD8 2048 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 USP24Q9UPU5 2620 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 SPTBP11277 2137 aa0.46□□□□□ -2.34
CLHC1-205ENST00000411884 KIAA1549LQ6ZVL6 1849 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 KNTC1P50748 2209 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 UNC13AQ9UPW8 1703 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 A0A096LNT2 108 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 RBAKDNA6NC62 111 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 MCRIP1C9JLW8 97 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 PYYP10082 97 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 SPCS2Q15005 226 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 KRTAP21-1Q3LI58 79 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 LINC01545Q5VT33 79 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 CYP2G1PQ6ZSU1 146 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 VSTM2AQ8TAG5 236 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 TSKUQ8WUA8 353 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 IFI27L1Q96BM0 104 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 PFDN5Q99471 154 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 PSMG3Q9BT73 122 aaPredicted RBP0.45□□□□□ -2.34
CLHC1-205ENST00000411884 PAIP2BQ9ULR5 123 aaKnown RBP0.45□□□□□ -2.34
CLHC1-205ENST00000411884 SYNJ1O43426 1573 aa0.45□□□□□ -2.34
CLHC1-205ENST00000411884 PTPRDP23468 1912 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 ERCC6Q03468 1493 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 NPFFO15130 113 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 ELOF1P60002 83 aaKnown RBP0.44□□□□□ -2.34
CLHC1-205ENST00000411884 COPZ1P61923 177 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 RRAS2P62070 204 aaPredicted RBP0.44□□□□□ -2.34
CLHC1-205ENST00000411884 SPANXN1Q5VSR9 72 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 MIC13Q5XKP0 118 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 SCIMPQ6UWF3 145 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 TPT1P8Q9HAU6 139 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 NDUFA12Q9UI09 145 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 LRP5O75197 1615 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 KIDINS220Q9ULH0 1771 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 KDM5CP41229 1560 aa0.44□□□□□ -2.34
CLHC1-205ENST00000411884 A6NIN4 97 aa0.43□□□□□ -2.34
CLHC1-205ENST00000411884 M0R129 80 aa0.43□□□□□ -2.34
CLHC1-205ENST00000411884 PIRTP0C851 137 aa0.43□□□□□ -2.34
CLHC1-205ENST00000411884 RPS25P62851 125 aaKnown RBP0.43□□□□□ -2.34
CLHC1-205ENST00000411884 EMX2Q04743 252 aa0.43□□□□□ -2.34
CLHC1-205ENST00000411884 SSBP1Q04837 148 aaKnown RBP0.43□□□□□ -2.34
CLHC1-205ENST00000411884 TCEAL4Q96EI5 215 aa0.43□□□□□ -2.34
CLHC1-205ENST00000411884 PRG4Q92954 1404 aaPredicted RBP0.43□□□□□ -2.34
CLHC1-205ENST00000411884 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.43□□□□□ -2.34
CLHC1-205ENST00000411884 NINQ8N4C6 2090 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 SOGA1O94964 1423 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 TRAV12-3A0A0B4J271 114 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 F2Z2F3 143 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 GUCA1AP43080 201 aaPredicted RBP0.42□□□□□ -2.34
CLHC1-205ENST00000411884 S100A12P80511 92 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 FAM74A4Q5TZK3 123 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 RPL7L1Q6DKI1 246 aaKnown RBP0.42□□□□□ -2.34
CLHC1-205ENST00000411884 Q6ZUT4 128 aa0.42□□□□□ -2.34
CLHC1-205ENST00000411884 ANK1P16157 1881 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 XIRP1Q702N8 1843 aaKnown RBP0.41□□□□□ -2.34
CLHC1-205ENST00000411884 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 PITX3O75364 302 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 PIPP12273 146 aaPredicted RBP0.41□□□□□ -2.34
CLHC1-205ENST00000411884 CCL3L1P16619 93 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 NPC2P61916 151 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 CCDC58Q4VC31 144 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 C9orf116Q5BN46 136 aaPredicted RBP0.41□□□□□ -2.34
CLHC1-205ENST00000411884 SLC48A1Q6P1K1 146 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 C4orf33Q8N1A6 199 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 KCNRGQ8N5I3 272 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 RPRMQ9NS64 109 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 TMEM242Q9NWH2 141 aa0.41□□□□□ -2.34
CLHC1-205ENST00000411884 IFNA17P01571 189 aa0.4□□□□□ -2.35
CLHC1-205ENST00000411884 PRH1P02810 166 aa0.4□□□□□ -2.35
CLHC1-205ENST00000411884 IL5P05113 134 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms