RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 TRBV6-4A0A1B0GX49 114 aa15.07■□□□□ 0
MSH6-202ENST00000411819 ZNF726P1Q15940 193 aa15.07■□□□□ 0
MSH6-202ENST00000411819 OR10J3Q5JRS4 329 aa15.07■□□□□ 0
MSH6-202ENST00000411819 OR2T35Q8NGX2 323 aa15.07■□□□□ 0
MSH6-202ENST00000411819 LINC00479Q96M42 142 aa15.07■□□□□ 0
MSH6-202ENST00000411819 TRAV8-6A0A0B4J262 113 aa15.06■□□□□ 0
MSH6-202ENST00000411819 PSCAO43653 123 aa15.06■□□□□ 0
MSH6-202ENST00000411819 RNASE3P12724 160 aaKnown RBP15.06■□□□□ 0
MSH6-202ENST00000411819 S100A4P26447 101 aaKnown RBP15.06■□□□□ 0
MSH6-202ENST00000411819 ARL2-SNX15V9GYD0 113 aa15.06■□□□□ 0
MSH6-202ENST00000411819 FGF8P55075 233 aaPredicted RBP15.05■□□□□ -0
MSH6-202ENST00000411819 AKR1C8PQ5T2L2 129 aa15.05■□□□□ -0
MSH6-202ENST00000411819 PEX7O00628 323 aa15.04■□□□□ -0
MSH6-202ENST00000411819 MGST1P10620 155 aaKnown RBP15.04■□□□□ -0
MSH6-202ENST00000411819 LINC01556Q5JQF7 62 aa15.04■□□□□ -0
MSH6-202ENST00000411819 Q86TA4 180 aa15.04■□□□□ -0
MSH6-202ENST00000411819 ASIPP42127 132 aa15.03■□□□□ -0
MSH6-202ENST00000411819 PTH2Q96A98 100 aa15.03■□□□□ -0
MSH6-202ENST00000411819 Q9HAA7 133 aa15.03■□□□□ -0
MSH6-202ENST00000411819 IGKV3D-20A0A0C4DH25 116 aa15.02■□□□□ -0
MSH6-202ENST00000411819 IGHV3-30P01768 117 aa15.02■□□□□ -0
MSH6-202ENST00000411819 IGHV3-33P01772 117 aa15.02■□□□□ -0
MSH6-202ENST00000411819 IGHV3-30-3P0DP02 117 aa15.02■□□□□ -0
MSH6-202ENST00000411819 IGHV3-30-5P0DP03 117 aa15.02■□□□□ -0
MSH6-202ENST00000411819 LGALSLQ3ZCW2 172 aaPredicted RBP15.02■□□□□ -0
MSH6-202ENST00000411819 ATP6V0E2Q8NHE4 81 aa15.02■□□□□ -0
MSH6-202ENST00000411819 FAM74A7A6NL05 159 aa15.01□□□□□ -0.01
MSH6-202ENST00000411819 FABP5P3A8MUU1 101 aa15.01□□□□□ -0.01
MSH6-202ENST00000411819 LELP1Q5T871 98 aa15.01□□□□□ -0.01
MSH6-202ENST00000411819 PARLQ9H300 379 aa15.01□□□□□ -0.01
MSH6-202ENST00000411819 BOLA1Q9Y3E2 137 aa15.01□□□□□ -0.01
MSH6-202ENST00000411819 A8MWV9 139 aa15□□□□□ -0.01
MSH6-202ENST00000411819 B4DEV8 164 aa15□□□□□ -0.01
MSH6-202ENST00000411819 ARPC5O15511 151 aa15□□□□□ -0.01
MSH6-202ENST00000411819 KRTAP10-1P60331 282 aa15□□□□□ -0.01
MSH6-202ENST00000411819 HIST1H2BAQ96A08 127 aa15□□□□□ -0.01
MSH6-202ENST00000411819 NKX6-2Q9C056 277 aaPredicted RBP15□□□□□ -0.01
MSH6-202ENST00000411819 GTSF1LQ9H1H1 148 aa15□□□□□ -0.01
MSH6-202ENST00000411819 MAP1LC3B2A6NCE7 125 aa14.99□□□□□ -0.01
MSH6-202ENST00000411819 IBA57-AS1B1ANH7 110 aa14.99□□□□□ -0.01
MSH6-202ENST00000411819 EPM2AB3EWF7 344 aa14.99□□□□□ -0.01
MSH6-202ENST00000411819 H3BVH4 76 aa14.99□□□□□ -0.01
MSH6-202ENST00000411819 MAP1LC3BQ9GZQ8 125 aa14.99□□□□□ -0.01
MSH6-202ENST00000411819 GAGE12JA6NER3 117 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 M0R036 132 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 UBE2G1P62253 170 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 GAGE1Q13065 139 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 GAGE4Q13068 117 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 GAGE5Q13069 117 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 RGS21Q2M5E4 152 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 GAGE13Q4V321 117 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 ZFP2Q6ZN57 461 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 Q6ZSN1 163 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 ZC2HC1AQ96GY0 325 aa14.98□□□□□ -0.01
MSH6-202ENST00000411819 G3V3Q6 166 aa14.97□□□□□ -0.01
MSH6-202ENST00000411819 GCSHP23434 173 aa14.97□□□□□ -0.01
MSH6-202ENST00000411819 XGP55808 180 aa14.97□□□□□ -0.01
MSH6-202ENST00000411819 JPT2Q9H910 190 aa14.97□□□□□ -0.01
MSH6-202ENST00000411819 IL36BQ9NZH7 164 aa14.97□□□□□ -0.01
MSH6-202ENST00000411819 PIK3CD-AS1Q5SR53 167 aa14.96□□□□□ -0.01
MSH6-202ENST00000411819 SYT8Q8NBV8 401 aa14.96□□□□□ -0.01
MSH6-202ENST00000411819 IGLV5-52A0A0A0MRZ9 124 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 GRIFINA4D1Z8 144 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 SH2D1AO60880 128 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 CST9LP1Q5W188 147 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 STOML3Q8TAV4 291 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 FMC1Q96HJ9 113 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 CYTL1Q9NRR1 136 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 ZFP30Q9Y2G7 519 aa14.95□□□□□ -0.02
MSH6-202ENST00000411819 LRCOL1A6NCL2 159 aa14.94□□□□□ -0.02
MSH6-202ENST00000411819 ARMS2P0C7Q2 107 aa14.94□□□□□ -0.02
MSH6-202ENST00000411819 FAM162BQ5T6X4 162 aa14.94□□□□□ -0.02
MSH6-202ENST00000411819 DMRTA1Q5VZB9 504 aa14.94□□□□□ -0.02
MSH6-202ENST00000411819 OR11H4Q8NGC9 324 aa14.94□□□□□ -0.02
MSH6-202ENST00000411819 SAMD10Q9BYL1 202 aa14.94□□□□□ -0.02
MSH6-202ENST00000411819 KRBOX1C9JBD0 128 aa14.93□□□□□ -0.02
MSH6-202ENST00000411819 SMLR1H3BR10 107 aa14.93□□□□□ -0.02
MSH6-202ENST00000411819 CRIP1P50238 77 aa14.93□□□□□ -0.02
MSH6-202ENST00000411819 FAM74A4Q5TZK3 123 aa14.93□□□□□ -0.02
MSH6-202ENST00000411819 Q8N3U1 123 aa14.93□□□□□ -0.02
MSH6-202ENST00000411819 C14orf178Q8N769 122 aaPredicted RBP14.93□□□□□ -0.02
MSH6-202ENST00000411819 TMSB15BA0A087X1C1 80 aa14.92□□□□□ -0.02
MSH6-202ENST00000411819 RHODO00212 210 aa14.92□□□□□ -0.02
MSH6-202ENST00000411819 LINC00694P0DN24 101 aa14.92□□□□□ -0.02
MSH6-202ENST00000411819 AKR1C3P42330 323 aa14.92□□□□□ -0.02
MSH6-202ENST00000411819 LAGE3Q14657 143 aa14.92□□□□□ -0.02
MSH6-202ENST00000411819 NTN5Q8WTR8 489 aaPredicted RBP14.92□□□□□ -0.02
MSH6-202ENST00000411819 FRZBQ92765 325 aa14.92□□□□□ -0.02
MSH6-202ENST00000411819 TPT1P13693 172 aaKnown RBP14.91□□□□□ -0.02
MSH6-202ENST00000411819 FHITP49789 147 aa14.91□□□□□ -0.02
MSH6-202ENST00000411819 UFSP1Q6NVU6 142 aa14.91□□□□□ -0.02
MSH6-202ENST00000411819 Q8N814 137 aa14.91□□□□□ -0.02
MSH6-202ENST00000411819 Q9UF83 564 aa14.91□□□□□ -0.02
MSH6-202ENST00000411819 PHLDA3Q9Y5J5 127 aa14.91□□□□□ -0.02
MSH6-202ENST00000411819 M0R381 172 aa14.9□□□□□ -0.02
MSH6-202ENST00000411819 HAMPP81172 84 aa14.9□□□□□ -0.02
MSH6-202ENST00000411819 DNLZQ5SXM8 178 aa14.9□□□□□ -0.02
MSH6-202ENST00000411819 Q5VSD8 79 aa14.9□□□□□ -0.02
MSH6-202ENST00000411819 COX8CQ7Z4L0 72 aa14.9□□□□□ -0.02
MSH6-202ENST00000411819 TCEAL7Q9BRU2 100 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms