RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 GAGE1Q13065 139 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 GAGE4Q13068 117 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 GAGE5Q13069 117 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 ACOT6Q3I5F7 207 aaPredicted RBP9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 TOR2AQ5JU69 321 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 TMEM75Q8N9X5 138 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 PPP1R1CQ8WVI7 109 aa9.38□□□□□ -0.91
HLA-DQB2-229ENST00000411527 RBFOX3A6NFN3 312 aa9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 HMGB3O15347 200 aaKnown RBP9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 GCGP01275 180 aa9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 ASAH1Q13510 395 aa9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 PTH2Q96A98 100 aa9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 COX11Q9Y6N1 276 aa9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 HMCN2Q8NDA2 5059 aa9.37□□□□□ -0.91
HLA-DQB2-229ENST00000411527 MPC2O95563 127 aa9.36□□□□□ -0.91
HLA-DQB2-229ENST00000411527 RNASE3P12724 160 aaKnown RBP9.36□□□□□ -0.91
HLA-DQB2-229ENST00000411527 RPL12P30050 165 aaKnown RBP9.36□□□□□ -0.91
HLA-DQB2-229ENST00000411527 H2BFSP57053 126 aa9.36□□□□□ -0.91
HLA-DQB2-229ENST00000411527 RAB2AP61019 212 aa9.36□□□□□ -0.91
HLA-DQB2-229ENST00000411527 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
HLA-DQB2-229ENST00000411527 SERTM2A0A1B0GWG4 89 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 K7EQM0 130 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 ATP6V1G1O75348 118 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 TCRAP04437 139 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 ZFP2Q6ZN57 461 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 Q8N976 141 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 OR10G9Q8NGN4 311 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 OR10G7Q8NGN6 311 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 OR2T35Q8NGX2 323 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 RMI2Q96E14 147 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 CHAC1Q9BUX1 264 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 PARLQ9H300 379 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 WFDC1Q9HC57 220 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 Q9UF83 564 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 PSG8Q9UQ74 426 aa9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
HLA-DQB2-229ENST00000411527 A0A087WWC5 75 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 A8MWV9 139 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 OXTP01178 125 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 LINC00694P0DN24 101 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 LGALSLQ3ZCW2 172 aaPredicted RBP9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 ZFP69Q49AA0 526 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 SMUG1Q53HV7 270 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 PRNTQ86SH4 94 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 CYB561D1Q8N8Q1 229 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
HLA-DQB2-229ENST00000411527 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 RNF222A6NCQ9 220 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 IGLV2-11P01706 119 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 PET100P0DJ07 73 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 JPT2Q9H910 190 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 URGCP-MRPS24S4R325 110 aa9.33□□□□□ -0.92
HLA-DQB2-229ENST00000411527 INMT-MINDY4F8WBC2 141 aa9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 CDC34P49427 236 aaPredicted RBP9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 FGF8P55075 233 aaPredicted RBP9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 SUMO1P63165 101 aaKnown RBP9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 NDUFA5Q16718 116 aa9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 C14orf178Q8N769 122 aaPredicted RBP9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 EPDR1Q9UM22 224 aa9.32□□□□□ -0.92
HLA-DQB2-229ENST00000411527 STAG3L2P0CL84 134 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 STAG3L3P0CL85 134 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 SAPCD1Q5SSQ6 148 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 NIT1Q86X76 327 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
HLA-DQB2-229ENST00000411527 IGKV3D-20A0A0C4DH25 116 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 SSNA1O43805 119 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 SEC11BP0C7V7 166 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 GCHFRP30047 84 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 ASIPP42127 132 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 PIK3CD-AS1Q5SR53 167 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 UFSP1Q6NVU6 142 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
HLA-DQB2-229ENST00000411527 S100A1P23297 94 aa9.29□□□□□ -0.92
HLA-DQB2-229ENST00000411527 SUN5Q8TC36 379 aa9.29□□□□□ -0.92
HLA-DQB2-229ENST00000411527 A0A087WX48 190 aa9.28□□□□□ -0.92
HLA-DQB2-229ENST00000411527 FABP5P3A8MUU1 101 aa9.28□□□□□ -0.92
HLA-DQB2-229ENST00000411527 UPK1BO75841 260 aa9.28□□□□□ -0.92
HLA-DQB2-229ENST00000411527 IGLV2-8P01709 118 aa9.28□□□□□ -0.92
HLA-DQB2-229ENST00000411527 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
HLA-DQB2-229ENST00000411527 IL36BQ9NZH7 164 aa9.28□□□□□ -0.92
HLA-DQB2-229ENST00000411527 TRAV34A0A0B4J273 112 aa9.27□□□□□ -0.93
HLA-DQB2-229ENST00000411527 H3BVH4 76 aa9.27□□□□□ -0.93
HLA-DQB2-229ENST00000411527 DEFA1P59665 94 aa9.27□□□□□ -0.93
HLA-DQB2-229ENST00000411527 DEFA3P59666 94 aa9.27□□□□□ -0.93
HLA-DQB2-229ENST00000411527 ELOBQ15370 118 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms