RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MUC21A0A140T8X8 626 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 FCER1GP30273 86 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 SYNJ2BPP57105 145 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 SSTP61278 116 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 ANXA2RQ3ZCQ2 193 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 MUC21Q5SSG8 566 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 FOXI2Q6ZQN5 318 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
LIMS1-205ENST00000410093 C7orf71A4D174 169 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 LINC01549A6NIU2 74 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 EVI2AP22794 236 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 HNRNPA3P51991 378 aaKnown RBP10.17□□□□□ -0.78
LIMS1-205ENST00000410093 C10orf99Q6UWK7 81 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 MDFIQ99750 246 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 PMCHL2Q9BQD1 86 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 SNHG12Q9BXW3 62 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 IGKV3-7A0A075B6H7 116 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 A0A096LNJ9 63 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 IGLL1P15814 213 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 G0S2P27469 103 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 PRR31Q5SQ13 230 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 Q6ZN92 141 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 POM121L12Q8N7R1 296 aa10.17□□□□□ -0.78
LIMS1-205ENST00000410093 ATP5LO75964 103 aa10.16□□□□□ -0.78
LIMS1-205ENST00000410093 LINC00173Q6ZV60 143 aa10.16□□□□□ -0.78
LIMS1-205ENST00000410093 NRACQ8N912 160 aa10.16□□□□□ -0.78
LIMS1-205ENST00000410093 OR1N2Q8NGR9 330 aa10.16□□□□□ -0.78
LIMS1-205ENST00000410093 SPATA3Q8NHX4 192 aa10.16□□□□□ -0.78
LIMS1-205ENST00000410093 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
LIMS1-205ENST00000410093 F6UB75 175 aa10.15□□□□□ -0.78
LIMS1-205ENST00000410093 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
LIMS1-205ENST00000410093 NCR2O95944 276 aa10.15□□□□□ -0.78
LIMS1-205ENST00000410093 CDKN1BP46527 198 aa10.15□□□□□ -0.78
LIMS1-205ENST00000410093 TCTEX1D4Q5JR98 221 aa10.15□□□□□ -0.78
LIMS1-205ENST00000410093 WFDC3Q8IUB2 231 aa10.15□□□□□ -0.78
LIMS1-205ENST00000410093 IGLV2-18A0A075B6J9 118 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 ZNF688P0C7X2 276 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
LIMS1-205ENST00000410093 RPL32P62910 135 aaKnown RBP10.14□□□□□ -0.79
LIMS1-205ENST00000410093 LAGE3Q14657 143 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 ORMDL2Q53FV1 153 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 SYT8Q8NBV8 401 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 OR9G4Q8NGQ1 327 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 GOLT1BQ9Y3E0 138 aa10.14□□□□□ -0.79
LIMS1-205ENST00000410093 A8MTW9 85 aa10.13□□□□□ -0.79
LIMS1-205ENST00000410093 SMIM17P0DL12 118 aa10.13□□□□□ -0.79
LIMS1-205ENST00000410093 KIR3DS1Q14943 382 aa10.13□□□□□ -0.79
LIMS1-205ENST00000410093 TRAV25A0A0B4J276 109 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 J3KRW8 73 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 EREGO14944 169 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 NUTF2P61970 127 aaKnown RBP10.12□□□□□ -0.79
LIMS1-205ENST00000410093 COL5A1-AS1Q5SY13 56 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 SLC25A34Q6PIV7 304 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 OR11H1Q8NG94 326 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 SVEP1Q4LDE5 3571 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 TRGV11A0A075B6L2 103 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 DNAJC9-AS1A6NH13 148 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 Q6ZSV7 163 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 CLUHP3Q96NS8 147 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 C16orf95Q9H693 158 aa10.12□□□□□ -0.79
LIMS1-205ENST00000410093 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
LIMS1-205ENST00000410093 GNRH2O43555 120 aa10.11□□□□□ -0.79
LIMS1-205ENST00000410093 EDN2P20800 178 aa10.11□□□□□ -0.79
LIMS1-205ENST00000410093 TFPI2P48307 235 aa10.11□□□□□ -0.79
LIMS1-205ENST00000410093 SUMO2P61956 95 aaKnown RBP10.11□□□□□ -0.79
LIMS1-205ENST00000410093 C9orf85Q96MD7 179 aa10.11□□□□□ -0.79
LIMS1-205ENST00000410093 ZMAT5Q9UDW3 170 aaKnown RBP10.11□□□□□ -0.79
LIMS1-205ENST00000410093 TIMM8BQ9Y5J9 83 aaPredicted RBP10.11□□□□□ -0.79
LIMS1-205ENST00000410093 CUBNO60494 3623 aa10.1□□□□□ -0.79
LIMS1-205ENST00000410093 ATRQ13535 2644 aa10.1□□□□□ -0.79
LIMS1-205ENST00000410093 RNASE1P07998 156 aaKnown RBP10.1□□□□□ -0.79
LIMS1-205ENST00000410093 CD7P09564 240 aa10.1□□□□□ -0.79
LIMS1-205ENST00000410093 DEFB1P60022 68 aa10.1□□□□□ -0.79
LIMS1-205ENST00000410093 MAJINQ3KP22 176 aa10.1□□□□□ -0.79
LIMS1-205ENST00000410093 PIK3CD-AS1Q5SR53 167 aa10.1□□□□□ -0.79
LIMS1-205ENST00000410093 Q6ZQT7 251 aa10.1□□□□□ -0.79
LIMS1-205ENST00000410093 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
LIMS1-205ENST00000410093 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 COX8AP10176 69 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 SLURP1P55000 103 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
LIMS1-205ENST00000410093 C14orf178Q8N769 122 aaPredicted RBP10.09□□□□□ -0.79
LIMS1-205ENST00000410093 KLHL30-AS1Q8NEE0 82 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 DYNLRB2Q8TF09 96 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 DUX5Q96PT3 197 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 SPAG8Q99932 426 aaPredicted RBP10.09□□□□□ -0.79
LIMS1-205ENST00000410093 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
LIMS1-205ENST00000410093 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 A0A1B0GV90 55 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 hDV102S1A0JD36 115 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 H0Y8G0 127 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 TCAPO15273 167 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 DLEU1O43261 78 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 AMTNQ6UX39 209 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 C12orf54Q6X4T0 127 aa10.08□□□□□ -0.8
LIMS1-205ENST00000410093 ADAMTSL5Q6ZMM2 481 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms