RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 TRAV8-2A0A0B4J237 113 aa12.83□□□□□ -0.36
PDK1-203ENST00000410055 PRSS1P07477 247 aa12.83□□□□□ -0.36
PDK1-203ENST00000410055 BRD3OSQ6XYD6 125 aa12.83□□□□□ -0.36
PDK1-203ENST00000410055 CACNA1AO00555 2505 aa12.83□□□□□ -0.36
PDK1-203ENST00000410055 SRSF9Q13242 221 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDK1-203ENST00000410055 MINOS1Q5TGZ0 78 aa12.83□□□□□ -0.36
PDK1-203ENST00000410055 HHLA3Q9XRX5 114 aa12.83□□□□□ -0.36
PDK1-203ENST00000410055 MINOS1-NBL1R4GNA1 71 aa12.83□□□□□ -0.36
PDK1-203ENST00000410055 CELSR2Q9HCU4 2923 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 DOPEY2Q9Y3R5 2298 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 C19orf84I3L1E1 186 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 LINC00694P0DN24 101 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 ANKRD29Q8N6D5 301 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 VCX2Q9H322 139 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 TMEM160Q9NX00 188 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 TMEM8BA6NDV4 472 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 CKS2P33552 79 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 DTX2Q86UW9 622 aa12.82□□□□□ -0.36
PDK1-203ENST00000410055 NRGNQ92686 78 aa12.81□□□□□ -0.36
PDK1-203ENST00000410055 CREBBPQ92793 2442 aa12.81□□□□□ -0.36
PDK1-203ENST00000410055 LINC01549A6NIU2 74 aa12.81□□□□□ -0.36
PDK1-203ENST00000410055 UTP20O75691 2785 aaKnown RBP12.81□□□□□ -0.36
PDK1-203ENST00000410055 POLQO75417 2590 aa12.81□□□□□ -0.36
PDK1-203ENST00000410055 HOXA3O43365 443 aaPredicted RBP12.81□□□□□ -0.36
PDK1-203ENST00000410055 IGHG4P01861 327 aa12.81□□□□□ -0.36
PDK1-203ENST00000410055 PKD1L2Q7Z442 2459 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 EFNA4P52798 201 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 MRPL51Q4U2R6 128 aaKnown RBP12.8□□□□□ -0.36
PDK1-203ENST00000410055 USP9YO00507 2555 aaPredicted RBP12.8□□□□□ -0.36
PDK1-203ENST00000410055 IGKV3-7A0A075B6H7 116 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 UBE2E1P51965 193 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 ORMDL3Q8N138 153 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 CHCHD5Q9BSY4 110 aa12.8□□□□□ -0.36
PDK1-203ENST00000410055 FAM104BQ5XKR9 115 aa12.79□□□□□ -0.36
PDK1-203ENST00000410055 TRAV25A0A0B4J276 109 aa12.79□□□□□ -0.36
PDK1-203ENST00000410055 GAS8-AS1O95177 125 aa12.79□□□□□ -0.36
PDK1-203ENST00000410055 GNLYP22749 145 aa12.79□□□□□ -0.36
PDK1-203ENST00000410055 LY6EQ16553 131 aa12.79□□□□□ -0.36
PDK1-203ENST00000410055 ZFYVE26Q68DK2 2539 aa12.79□□□□□ -0.36
PDK1-203ENST00000410055 SMIM9A6NGZ8 99 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 EBI3Q14213 229 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 FOXC2Q99958 501 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 NPYP01303 97 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 IGKCP01834 107 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 LMO4P61968 165 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 FLNCQ14315 2725 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 TRAV40A0A0B4J280 105 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 TMEM262E9PQX1 116 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 NPFFO15130 113 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 BUB3O43684 328 aa12.78□□□□□ -0.36
PDK1-203ENST00000410055 FAM110DQ8TAY7 271 aaPredicted RBP12.78□□□□□ -0.36
PDK1-203ENST00000410055 A8MWV9 139 aa12.77□□□□□ -0.36
PDK1-203ENST00000410055 RASL10AQ92737 203 aa12.77□□□□□ -0.36
PDK1-203ENST00000410055 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
PDK1-203ENST00000410055 ABCA2Q9BZC7 2435 aa12.76□□□□□ -0.37
PDK1-203ENST00000410055 MYO18BQ8IUG5 2567 aa12.76□□□□□ -0.37
PDK1-203ENST00000410055 SPRY2O43597 315 aa12.75□□□□□ -0.37
PDK1-203ENST00000410055 RPL11P62913 178 aaKnown RBP12.75□□□□□ -0.37
PDK1-203ENST00000410055 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
PDK1-203ENST00000410055 IGHV3-11P01762 117 aa12.75□□□□□ -0.37
PDK1-203ENST00000410055 DEFB1P60022 68 aa12.75□□□□□ -0.37
PDK1-203ENST00000410055 FAM208BQ5VWN6 2430 aa12.75□□□□□ -0.37
PDK1-203ENST00000410055 TCL1BO95988 128 aa12.75□□□□□ -0.37
PDK1-203ENST00000410055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.75□□□□□ -0.37
PDK1-203ENST00000410055 PIEZO1Q92508 2521 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 HLA-DRB4P13762 266 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 METTL26Q96S19 204 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 HLA-DRB4X5D2U9 266 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 ZNF493Q6ZR52 646 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 ITLN2Q8WWU7 325 aaPredicted RBP12.74□□□□□ -0.37
PDK1-203ENST00000410055 EEF1AKMT3Q96AZ1 226 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
PDK1-203ENST00000410055 CFAP46Q8IYW2 2715 aa12.73□□□□□ -0.37
PDK1-203ENST00000410055 SRSF1Q07955 248 aaKnown RBP eCLIP12.73□□□□□ -0.376e-6■■■□□ 19.1
PDK1-203ENST00000410055 SORL1Q92673 2214 aa12.73□□□□□ -0.37
PDK1-203ENST00000410055 CLPSL1A2RUU4 121 aa12.73□□□□□ -0.37
PDK1-203ENST00000410055 TRGV3P03979 118 aa12.73□□□□□ -0.37
PDK1-203ENST00000410055 LEPP41159 167 aa12.73□□□□□ -0.37
PDK1-203ENST00000410055 C15orf53Q8NAA6 179 aa12.73□□□□□ -0.37
PDK1-203ENST00000410055 KLK5Q9Y337 293 aaPredicted RBP12.73□□□□□ -0.37
PDK1-203ENST00000410055 ACACBO00763 2458 aa12.73□□□□□ -0.37
PDK1-203ENST00000410055 TRBV7-3A0A075B6L6 115 aa12.72□□□□□ -0.37
PDK1-203ENST00000410055 IGHV4-39P01824 125 aa12.72□□□□□ -0.37
PDK1-203ENST00000410055 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
PDK1-203ENST00000410055 FAM19A5Q7Z5A7 132 aaPredicted RBP12.72□□□□□ -0.37
PDK1-203ENST00000410055 TRBV12-3P01733 135 aa12.72□□□□□ -0.37
PDK1-203ENST00000410055 C16orf92Q96LL3 132 aa12.72□□□□□ -0.37
PDK1-203ENST00000410055 LINC01587Q99440 93 aa12.72□□□□□ -0.37
PDK1-203ENST00000410055 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.37
PDK1-203ENST00000410055 DPM2O94777 84 aa12.71□□□□□ -0.37
PDK1-203ENST00000410055 C5orf56Q8N8D9 126 aa12.71□□□□□ -0.37
PDK1-203ENST00000410055 MRPL35Q9NZE8 188 aaKnown RBP12.71□□□□□ -0.37
PDK1-203ENST00000410055 C11orf21Q9P2W6 132 aa12.71□□□□□ -0.37
PDK1-203ENST00000410055 SCGB1C2P0DMR2 95 aa12.71□□□□□ -0.38
PDK1-203ENST00000410055 USP9XQ93008 2570 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms