RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NIT1Q86X76 327 aa10.43□□□□□ -0.74
LIMS2-206ENST00000409754 ORMDL3Q8N138 153 aa10.43□□□□□ -0.74
LIMS2-206ENST00000409754 CHCHD1Q96BP2 118 aaKnown RBP10.43□□□□□ -0.74
LIMS2-206ENST00000409754 RNF185Q96GF1 192 aa10.43□□□□□ -0.74
LIMS2-206ENST00000409754 NIT2Q9NQR4 276 aa10.43□□□□□ -0.74
LIMS2-206ENST00000409754 NBEAL1Q6ZS30 2694 aa10.43□□□□□ -0.74
LIMS2-206ENST00000409754 MGAM2Q2M2H8 2515 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 TRAV12-3A0A0B4J271 114 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 D6R8Y8 96 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 M0R2Z0 102 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 RAB4AP20338 218 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 RNASEKQ6P5S7 137 aaKnown RBP10.42□□□□□ -0.74
LIMS2-206ENST00000409754 SMIM15Q7Z3B0 74 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 URB1-AS1Q96HZ7 61 aa10.42□□□□□ -0.74
LIMS2-206ENST00000409754 GNRH2O43555 120 aa10.41□□□□□ -0.74
LIMS2-206ENST00000409754 HSBP1O75506 76 aa10.41□□□□□ -0.74
LIMS2-206ENST00000409754 PPBPP02775 128 aa10.41□□□□□ -0.74
LIMS2-206ENST00000409754 PMCHP20382 165 aa10.41□□□□□ -0.74
LIMS2-206ENST00000409754 SHISA2Q6UWI4 295 aa10.41□□□□□ -0.74
LIMS2-206ENST00000409754 PRELID3AQ96N28 172 aa10.41□□□□□ -0.74
LIMS2-206ENST00000409754 TRAV12-2A0A075B6T6 113 aa10.4□□□□□ -0.74
LIMS2-206ENST00000409754 LINC00614P0C842 121 aa10.4□□□□□ -0.74
LIMS2-206ENST00000409754 RNASE3P12724 160 aaKnown RBP10.4□□□□□ -0.74
LIMS2-206ENST00000409754 CKS2P33552 79 aa10.4□□□□□ -0.74
LIMS2-206ENST00000409754 Q6ZWC4 215 aa10.4□□□□□ -0.74
LIMS2-206ENST00000409754 PHLDA3Q9Y5J5 127 aa10.4□□□□□ -0.74
LIMS2-206ENST00000409754 TIMM8BQ9Y5J9 83 aaPredicted RBP10.4□□□□□ -0.74
LIMS2-206ENST00000409754 SAP30O75446 220 aa10.4□□□□□ -0.75
LIMS2-206ENST00000409754 OR2K2Q8NGT1 345 aa10.4□□□□□ -0.75
LIMS2-206ENST00000409754 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.75
LIMS2-206ENST00000409754 LAMTOR2Q9Y2Q5 125 aa10.4□□□□□ -0.75
LIMS2-206ENST00000409754 NXPH4O95158 308 aa10.39□□□□□ -0.75
LIMS2-206ENST00000409754 EVI2AP22794 236 aa10.39□□□□□ -0.75
LIMS2-206ENST00000409754 ODF3L2Q3SX64 289 aa10.39□□□□□ -0.75
LIMS2-206ENST00000409754 FAM19A2Q8N3H0 131 aa10.39□□□□□ -0.75
LIMS2-206ENST00000409754 SORL1Q92673 2214 aa10.39□□□□□ -0.75
LIMS2-206ENST00000409754 AGRNO00468 2067 aa10.38□□□□□ -0.75
LIMS2-206ENST00000409754 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
LIMS2-206ENST00000409754 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
LIMS2-206ENST00000409754 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
LIMS2-206ENST00000409754 IGLV1-51P01701 117 aa10.38□□□□□ -0.75
LIMS2-206ENST00000409754 CD7P09564 240 aa10.38□□□□□ -0.75
LIMS2-206ENST00000409754 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
LIMS2-206ENST00000409754 CMC4P56277 68 aaPredicted RBP10.38□□□□□ -0.75
LIMS2-206ENST00000409754 ZNF124Q15973 351 aa10.38□□□□□ -0.75
LIMS2-206ENST00000409754 CDPF1Q6NVV7 123 aa10.38□□□□□ -0.75
LIMS2-206ENST00000409754 IGHV3-16A0A0C4DH30 117 aa10.37□□□□□ -0.75
LIMS2-206ENST00000409754 M0R381 172 aa10.37□□□□□ -0.75
LIMS2-206ENST00000409754 CRXO43186 299 aaPredicted RBP10.37□□□□□ -0.75
LIMS2-206ENST00000409754 OR11H12B2RN74 326 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 NCR2O95944 276 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 NPYP01303 97 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 PRSS3P2Q8NHM4 247 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 IGHV1-24A0A0C4DH33 117 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 PF4P02776 101 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 FXYD7P58549 80 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 AP5S1Q9NUS5 200 aa10.36□□□□□ -0.75
LIMS2-206ENST00000409754 NOTCH1P46531 2555 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 TRGV11A0A075B6L2 103 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 SPRY2O43597 315 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 SCGB1D1O95968 90 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 IFI27P40305 119 aaPredicted RBP10.35□□□□□ -0.75
LIMS2-206ENST00000409754 Q8N1Y9 231 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 AP1S3Q96PC3 154 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
LIMS2-206ENST00000409754 TNFRSF6BO95407 300 aa10.34□□□□□ -0.75
LIMS2-206ENST00000409754 RBMY1A1P0DJD3 496 aaKnown RBP10.34□□□□□ -0.75
LIMS2-206ENST00000409754 RBMY1CP0DJD4 496 aa10.34□□□□□ -0.75
LIMS2-206ENST00000409754 S100A12P80511 92 aa10.34□□□□□ -0.75
LIMS2-206ENST00000409754 RBMY1FQ15415 496 aaKnown RBP10.34□□□□□ -0.75
LIMS2-206ENST00000409754 C20orf144Q9BQM9 153 aa10.34□□□□□ -0.75
LIMS2-206ENST00000409754 MAP1LC3AQ9H492 121 aa10.34□□□□□ -0.75
LIMS2-206ENST00000409754 LOC389332A0A1B0GUA5 103 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 PCP4L1A6NKN8 68 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 KRTDAPP60985 99 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 BEAN1Q3B7T3 259 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 STHQ8IWL8 128 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 MDFICQ9P1T7 246 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 FBN3Q75N90 2809 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 MEGF8Q7Z7M0 2845 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 C3orf79P0CE67 100 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
LIMS2-206ENST00000409754 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
LIMS2-206ENST00000409754 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 SYT8Q8NBV8 401 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 LINC00467Q9BRT7 94 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 GSN-AS1Q9NRJ2 163 aa10.33□□□□□ -0.76
LIMS2-206ENST00000409754 NOTCH3Q9UM47 2321 aa10.32□□□□□ -0.76
LIMS2-206ENST00000409754 DNAH3Q8TD57 4116 aa10.32□□□□□ -0.76
LIMS2-206ENST00000409754 LINC01546A6NGU7 62 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 1599.1 ms