RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
CHMP3-204ENST00000409727 IGHV3-16A0A0C4DH30 117 aa9.1□□□□□ -0.95
CHMP3-204ENST00000409727 A0A1B0GW15 77 aa9.1□□□□□ -0.95
CHMP3-204ENST00000409727 SNAI2O43623 268 aa9.1□□□□□ -0.95
CHMP3-204ENST00000409727 S100A8P05109 93 aa9.1□□□□□ -0.95
CHMP3-204ENST00000409727 SNRPEP62304 92 aaKnown RBP9.1□□□□□ -0.95
CHMP3-204ENST00000409727 MDFIQ99750 246 aa9.1□□□□□ -0.95
CHMP3-204ENST00000409727 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
CHMP3-204ENST00000409727 SRIP30626 198 aa9.09□□□□□ -0.95
CHMP3-204ENST00000409727 AMN1Q8IY45 258 aa9.09□□□□□ -0.95
CHMP3-204ENST00000409727 AMBPP02760 352 aa9.08□□□□□ -0.96
CHMP3-204ENST00000409727 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
CHMP3-204ENST00000409727 EVI2AP22794 236 aa9.08□□□□□ -0.96
CHMP3-204ENST00000409727 C1orf158Q8N1D5 194 aa9.08□□□□□ -0.96
CHMP3-204ENST00000409727 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
CHMP3-204ENST00000409727 WIPF1O43516 503 aa9.08□□□□□ -0.96
CHMP3-204ENST00000409727 CACNG7P62955 275 aa9.08□□□□□ -0.96
CHMP3-204ENST00000409727 SCRT2Q9NQ03 307 aa9.08□□□□□ -0.96
CHMP3-204ENST00000409727 LOC102724200A0A096LPH7 203 aaPredicted RBP9.07□□□□□ -0.96
CHMP3-204ENST00000409727 MED14OSP0DP75 135 aa9.07□□□□□ -0.96
CHMP3-204ENST00000409727 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
CHMP3-204ENST00000409727 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
CHMP3-204ENST00000409727 KRTAP10-11P60412 298 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 PDZD11Q5EBL8 140 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 MORN3Q6PF18 240 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-204ENST00000409727 C9orf85Q96MD7 179 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 GSN-AS1Q9NRJ2 163 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 AZU1P20160 251 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 FAM104BQ5XKR9 115 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 SMIM15Q7Z3B0 74 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 C14orf178Q8N769 122 aaPredicted RBP9.06□□□□□ -0.96
CHMP3-204ENST00000409727 GATD1Q8NB37 220 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 C20orf144Q9BQM9 153 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 TMEM191AQ9H0A3 160 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 CSTL1Q9H114 145 aa9.06□□□□□ -0.96
CHMP3-204ENST00000409727 IGHV4-4A0A075B6R2 117 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 LOC105371267A0A1B0GV96 52 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 C5orf52A6NGY3 159 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 G3V4G9 280 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 LCE2BO14633 110 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 NCR2O95944 276 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 IQCJQ1A5X6 159 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 MRPL51Q4U2R6 128 aaKnown RBP9.05□□□□□ -0.96
CHMP3-204ENST00000409727 ALKBH7Q9BT30 221 aaPredicted RBP9.05□□□□□ -0.96
CHMP3-204ENST00000409727 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 JPT2Q9H910 190 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 GOLT1BQ9Y3E0 138 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 MUC4Q99102 2169 aa9.05□□□□□ -0.96
CHMP3-204ENST00000409727 D6R8Y8 96 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 RAB4AP20338 218 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 BAGE3Q86Y29 109 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 TMEM256Q8N2U0 113 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 TRAV26-2A0A0B4J265 109 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 MGPP08493 103 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 RCHY1Q96PM5 261 aa9.04□□□□□ -0.96
CHMP3-204ENST00000409727 A0A087WWL8 130 aa9.03□□□□□ -0.96
CHMP3-204ENST00000409727 J3QL48 77 aa9.03□□□□□ -0.96
CHMP3-204ENST00000409727 GAS8-AS1O95177 125 aa9.03□□□□□ -0.96
CHMP3-204ENST00000409727 ZNF876PQ49A33 203 aa9.03□□□□□ -0.96
CHMP3-204ENST00000409727 SYT8Q8NBV8 401 aa9.03□□□□□ -0.96
CHMP3-204ENST00000409727 AP1S3Q96PC3 154 aa9.03□□□□□ -0.96
CHMP3-204ENST00000409727 NXPH4O95158 308 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 IGHV4-30-4P0DP06 118 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 CKS2P33552 79 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 FAM74A4Q5TZK3 123 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 LURAP1LQ8IV03 231 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 C11orf72Q8NBR9 251 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 LINC00467Q9BRT7 94 aa9.02□□□□□ -0.96
CHMP3-204ENST00000409727 NUPR1O60356 82 aa9.02□□□□□ -0.97
CHMP3-204ENST00000409727 SERF1AO75920 110 aa9.02□□□□□ -0.97
CHMP3-204ENST00000409727 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
CHMP3-204ENST00000409727 SMIM17P0DL12 118 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 GATA1P15976 413 aaPredicted RBP9.01□□□□□ -0.97
CHMP3-204ENST00000409727 HOXA5P20719 270 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 Q0VG73 95 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 OR10J3Q5JRS4 329 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 RNASE8Q8TDE3 154 aaKnown RBP9.01□□□□□ -0.97
CHMP3-204ENST00000409727 PRELID3AQ96N28 172 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 SAMD10Q9BYL1 202 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
CHMP3-204ENST00000409727 MRPL16Q9NX20 251 aaKnown RBP9.01□□□□□ -0.97
CHMP3-204ENST00000409727 LOC389332A0A1B0GUA5 103 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 M0R2P5 195 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 UBE2CO00762 179 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 DEFB135Q30KP9 77 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 ZNF705AQ6ZN79 300 aaPredicted RBP9□□□□□ -0.97
CHMP3-204ENST00000409727 S100A2P29034 98 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 APOC4P55056 127 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 LINC00310P59036 64 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 RRN3P1Q2M238 152 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 RNASEKQ6P5S7 137 aaKnown RBP9□□□□□ -0.97
CHMP3-204ENST00000409727 HIST3H2BBQ8N257 126 aa9□□□□□ -0.97
CHMP3-204ENST00000409727 TMEM263Q8WUH6 116 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms