RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 LY6G6EA0A0G2JKS1 128 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 HERVK_113P63121 156 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 FOXI2Q6ZQN5 318 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 MRPL36Q9P0J6 103 aaKnown RBP6.6□□□□□ -1.35
SCN9A-203ENST00000409672 U3KQA8 63 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 ADORA2A-AS1P86434 159 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 A0A087WZ39 114 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 ZNF124Q15973 351 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 VOPP1Q96AW1 172 aa6.6□□□□□ -1.35
SCN9A-203ENST00000409672 K7EQD1 137 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 NMSQ5H8A3 153 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 FAM208BQ5VWN6 2430 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 KLF2Q9Y5W3 355 aaPredicted RBP6.59□□□□□ -1.35
SCN9A-203ENST00000409672 DNAJC9-AS1A6NH13 148 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 TRBV19A0A075B6N1 114 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 A8MWP6 167 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 GATA1P15976 413 aaPredicted RBP6.59□□□□□ -1.35
SCN9A-203ENST00000409672 UBE2D4Q9Y2X8 147 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 IGKV1-17P01599 117 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 MUC6Q6W4X9 2439 aa6.59□□□□□ -1.35
SCN9A-203ENST00000409672 FBLN5Q9UBX5 448 aa6.59□□□□□ -1.36
SCN9A-203ENST00000409672 KIAA1549LQ6ZVL6 1849 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 TRAV13-2A0A0B4J235 113 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 UBE2D1P51668 147 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 FAM104BQ5XKR9 115 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 PTPN13Q12923 2485 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 RBM3P98179 157 aaKnown RBP6.58□□□□□ -1.36
SCN9A-203ENST00000409672 WT1-ASQ06250 92 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 LINC00482Q8N8I6 264 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 ETV2O00321 342 aaPredicted RBP6.58□□□□□ -1.36
SCN9A-203ENST00000409672 NDUFB1O75438 58 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 PRR20EP86478 221 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 PRR20CP86479 221 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 PRR20DP86480 221 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 PRR20BP86481 221 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 PRR20AP86496 221 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 HIGD2AQ9BW72 106 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 PRSS46E5RG02 174 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 CTSZQ9UBR2 303 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 TRAV26-1A0A087WT03 109 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 CRYBA4P53673 196 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 CARHSP1Q9Y2V2 147 aaKnown RBP6.58□□□□□ -1.36
SCN9A-203ENST00000409672 SEC61GP60059 68 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 TMEM14EPQ6UXP3 125 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 NUP210LQ5VU65 1888 aa6.58□□□□□ -1.36
SCN9A-203ENST00000409672 H3BRN7 92 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 J3QRE1 110 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 PDE6HQ13956 83 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 MRPL35Q9NZE8 188 aaKnown RBP6.57□□□□□ -1.36
SCN9A-203ENST00000409672 ORMDL1Q9P0S3 153 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 PROK2Q9HC23 129 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 C17orf82Q86X59 251 aaPredicted RBP6.57□□□□□ -1.36
SCN9A-203ENST00000409672 IGFL3Q6UXB1 125 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 FAM231DQ6ZW35 169 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
SCN9A-203ENST00000409672 UBE2CO00762 179 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
SCN9A-203ENST00000409672 VSIG2Q96IQ7 327 aa6.57□□□□□ -1.36
SCN9A-203ENST00000409672 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 PYGO2Q9BRQ0 406 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 Q8N8P6 123 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 TEX22C9J3V5 150 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 TRBV12-3P01733 135 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 YPEL3P61236 119 aaPredicted RBP6.56□□□□□ -1.36
SCN9A-203ENST00000409672 SPINK6Q6UWN8 80 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 PIP4P1Q86T03 277 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 DKK2Q9UBU2 259 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 ACYP1P07311 99 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 NPYP01303 97 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 NPSP0C0P6 89 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 IGKV3D-7A0A0C4DH55 119 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 IGHV2-70P01814 119 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 IGHG2P01859 326 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 CRYGDP07320 174 aa6.56□□□□□ -1.36
SCN9A-203ENST00000409672 IGKV1D-37A0A075B6S9 117 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 C2orf70A6NJV1 201 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 BAALC-AS2P0C853 105 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 B9D2Q9BPU9 175 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 IGHV4-30-4P0DP06 118 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 PLA2G5P39877 138 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 SMR3AQ99954 134 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 ZFHX2Q9C0A1 2572 aaPredicted RBP6.55□□□□□ -1.36
SCN9A-203ENST00000409672 SIRPDQ9H106 197 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 PRRC2AP48634 2157 aaKnown RBP6.55□□□□□ -1.36
SCN9A-203ENST00000409672 RBAKDNA6NC62 111 aa6.55□□□□□ -1.36
SCN9A-203ENST00000409672 TECTAO75443 2155 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 CRIPAKQ8N1N5 446 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 SVIPQ8NHG7 77 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 DEFB131BA0A096LNP1 70 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 FAM231BA6NCW3 169 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 P0DMU3 169 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 FAM231AP0DMU4 169 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 FAM231CP0DMU5 169 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 J3QQQ9 107 aa6.54□□□□□ -1.36
SCN9A-203ENST00000409672 LY6G6DO95868 133 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms