RNA–Protein interactions for RNA: ENST00000409551.7

PAX3-207, Transcript of paired box 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-207ENST00000409551 M0R2Z0 102 aa12.33□□□□□ -0.44
PAX3-207ENST00000409551 RAB4AP20338 218 aa12.33□□□□□ -0.44
PAX3-207ENST00000409551 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.44
PAX3-207ENST00000409551 OR2K2Q8NGT1 345 aa12.33□□□□□ -0.44
PAX3-207ENST00000409551 RNF185Q96GF1 192 aa12.33□□□□□ -0.44
PAX3-207ENST00000409551 URB1-AS1Q96HZ7 61 aa12.33□□□□□ -0.44
PAX3-207ENST00000409551 D6R8Y8 96 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 GNRH2O43555 120 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 HSBP1O75506 76 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 PPBPP02775 128 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 AMTP48728 403 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
PAX3-207ENST00000409551 PRELID3AQ96N28 172 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 AGRNO00468 2067 aa12.32□□□□□ -0.44
PAX3-207ENST00000409551 PKD1L1Q8TDX9 2849 aa12.31□□□□□ -0.44
PAX3-207ENST00000409551 WNK1Q9H4A3 2382 aa12.31□□□□□ -0.44
PAX3-207ENST00000409551 RNASE3P12724 160 aaKnown RBP12.31□□□□□ -0.44
PAX3-207ENST00000409551 CMC4P56277 68 aaPredicted RBP12.31□□□□□ -0.44
PAX3-207ENST00000409551 TRAV12-2A0A075B6T6 113 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 SAP30O75446 220 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 PMCHP20382 165 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 CKS2P33552 79 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 IGLV1-51P01701 117 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 LINC00614P0C842 121 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 ODF3L2Q3SX64 289 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 LAMTOR2Q9Y2Q5 125 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 SORL1Q92673 2214 aa12.3□□□□□ -0.44
PAX3-207ENST00000409551 IGHV1OR15-1A0A075B7D0 117 aa12.29□□□□□ -0.44
PAX3-207ENST00000409551 NXPH4O95158 308 aa12.29□□□□□ -0.44
PAX3-207ENST00000409551 Q6ZWC4 215 aa12.29□□□□□ -0.44
PAX3-207ENST00000409551 CITED1Q99966 193 aa12.29□□□□□ -0.44
PAX3-207ENST00000409551 TIMM8BQ9Y5J9 83 aaPredicted RBP12.29□□□□□ -0.44
PAX3-207ENST00000409551 NBEAL1Q6ZS30 2694 aa12.28□□□□□ -0.44
PAX3-207ENST00000409551 RBMY1BA6NDE4 496 aaKnown RBP12.28□□□□□ -0.44
PAX3-207ENST00000409551 RBMY1EA6NEQ0 496 aaKnown RBP12.28□□□□□ -0.44
PAX3-207ENST00000409551 CD7P09564 240 aa12.28□□□□□ -0.44
PAX3-207ENST00000409551 RBMY1DP0C7P1 496 aaKnown RBP12.28□□□□□ -0.44
PAX3-207ENST00000409551 EVI2AP22794 236 aa12.28□□□□□ -0.44
PAX3-207ENST00000409551 ZNF124Q15973 351 aa12.28□□□□□ -0.44
PAX3-207ENST00000409551 MGAM2Q2M2H8 2515 aa12.28□□□□□ -0.44
PAX3-207ENST00000409551 VWFP04275 2813 aa12.28□□□□□ -0.44
PAX3-207ENST00000409551 CRXO43186 299 aaPredicted RBP12.28□□□□□ -0.44
PAX3-207ENST00000409551 FAM19A2Q8N3H0 131 aa12.28□□□□□ -0.44
PAX3-207ENST00000409551 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.45
PAX3-207ENST00000409551 OR11H12B2RN74 326 aa12.27□□□□□ -0.45
PAX3-207ENST00000409551 M0R381 172 aa12.27□□□□□ -0.45
PAX3-207ENST00000409551 C9orf85Q96MD7 179 aa12.27□□□□□ -0.45
PAX3-207ENST00000409551 PF4P02776 101 aa12.26□□□□□ -0.45
PAX3-207ENST00000409551 LINC00482Q8N8I6 264 aa12.26□□□□□ -0.45
PAX3-207ENST00000409551 PRSS3P2Q8NHM4 247 aa12.26□□□□□ -0.45
PAX3-207ENST00000409551 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
PAX3-207ENST00000409551 DPH3P1Q9H4G8 78 aa12.26□□□□□ -0.45
PAX3-207ENST00000409551 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 SMKR1H3BMG3 65 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 NPYP01303 97 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 FA2HQ7L5A8 372 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 C20orf144Q9BQM9 153 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 NCR2O95944 276 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 FXYD7P58549 80 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 MRAP2Q96G30 205 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 AP1S3Q96PC3 154 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 AP5S1Q9NUS5 200 aa12.25□□□□□ -0.45
PAX3-207ENST00000409551 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
PAX3-207ENST00000409551 RBMY1A1P0DJD3 496 aaKnown RBP12.24□□□□□ -0.45
PAX3-207ENST00000409551 RBMY1CP0DJD4 496 aa12.24□□□□□ -0.45
PAX3-207ENST00000409551 RBMY1FQ15415 496 aaKnown RBP12.24□□□□□ -0.45
PAX3-207ENST00000409551 BEAN1Q3B7T3 259 aa12.24□□□□□ -0.45
PAX3-207ENST00000409551 Q8N1Y9 231 aa12.24□□□□□ -0.45
PAX3-207ENST00000409551 LINC00467Q9BRT7 94 aa12.24□□□□□ -0.45
PAX3-207ENST00000409551 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
PAX3-207ENST00000409551 SCGB1D1O95968 90 aa12.23□□□□□ -0.45
PAX3-207ENST00000409551 TRPT1Q86TN4 253 aaKnown RBP12.23□□□□□ -0.45
PAX3-207ENST00000409551 STHQ8IWL8 128 aa12.23□□□□□ -0.45
PAX3-207ENST00000409551 MUC4Q99102 2169 aa12.23□□□□□ -0.45
PAX3-207ENST00000409551 SPRY2O43597 315 aa12.23□□□□□ -0.45
PAX3-207ENST00000409551 TNFRSF6BO95407 300 aa12.23□□□□□ -0.45
PAX3-207ENST00000409551 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
PAX3-207ENST00000409551 S100A12P80511 92 aa12.23□□□□□ -0.45
PAX3-207ENST00000409551 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
PAX3-207ENST00000409551 INSP01308 110 aa12.22□□□□□ -0.45
PAX3-207ENST00000409551 DEFB125Q8N687 156 aa12.22□□□□□ -0.45
PAX3-207ENST00000409551 POM121L12Q8N7R1 296 aa12.22□□□□□ -0.45
PAX3-207ENST00000409551 SYT8Q8NBV8 401 aa12.22□□□□□ -0.45
PAX3-207ENST00000409551 GSN-AS1Q9NRJ2 163 aa12.22□□□□□ -0.45
PAX3-207ENST00000409551 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
PAX3-207ENST00000409551 LOC389332A0A1B0GUA5 103 aa12.21□□□□□ -0.45
PAX3-207ENST00000409551 KRTDAPP60985 99 aa12.21□□□□□ -0.45
PAX3-207ENST00000409551 KIF25-AS1Q9Y6Z4 181 aa12.21□□□□□ -0.45
PAX3-207ENST00000409551 FBN3Q75N90 2809 aa12.21□□□□□ -0.45
PAX3-207ENST00000409551 LINC01546A6NGU7 62 aa12.2□□□□□ -0.46
PAX3-207ENST00000409551 CBY3A6NI87 242 aa12.2□□□□□ -0.46
PAX3-207ENST00000409551 GAS8-AS1O95177 125 aa12.2□□□□□ -0.46
PAX3-207ENST00000409551 C3orf79P0CE67 100 aa12.2□□□□□ -0.46
PAX3-207ENST00000409551 C14orf178Q8N769 122 aaPredicted RBP12.2□□□□□ -0.46
PAX3-207ENST00000409551 NRACQ8N912 160 aa12.2□□□□□ -0.46
PAX3-207ENST00000409551 NXT2Q9NPJ8 142 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms