RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CLEC3BP05452 202 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 NTF3P20783 257 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 BMI1P35226 326 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 RPS20P60866 119 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 RELQ04864 619 aaPredicted RBP9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 RNASEKQ6P5S7 137 aaKnown RBP9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 FAM19A2Q8N3H0 131 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 URB1-AS1Q96HZ7 61 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 C8orf49Q96NF6 230 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 MIEN1Q9BRT3 115 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 SLC50A1Q9BRV3 221 aa9.32□□□□□ -0.92
CHRNA1-205ENST00000409542 IGKV2-40A0A087WW87 121 aaPredicted RBP9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 TMEM189A5PLL7 270 aa9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 RBAKDNA6NC62 111 aa9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 M0R2Z0 102 aa9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 BUB3O43684 328 aa9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 IGKV2D-40P01614 121 aaPredicted RBP9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 ARMS2P0C7Q2 107 aa9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 RNF183Q96D59 192 aa9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 FAT2Q9NYQ8 4349 aa9.31□□□□□ -0.92
CHRNA1-205ENST00000409542 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 ZNF493Q6ZR52 646 aa9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 MRPL53Q96EL3 112 aaKnown RBP9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 U3KQE9 123 aa9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 DNAH2Q9P225 4427 aa9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 ABCA13Q86UQ4 5058 aa9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 PKHD1P08F94 4074 aa9.3□□□□□ -0.92
CHRNA1-205ENST00000409542 DNAH17Q9UFH2 4485 aa9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 IGHV3-35A0A0C4DH35 117 aa9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 CTRLP40313 264 aa9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 TDRG1Q3Y452 100 aa9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 FAM106AQ4KMX7 169 aa9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 METTL26Q96S19 204 aa9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 PAM16Q9Y3D7 125 aa9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 DYNC1H1Q14204 4646 aaKnown RBP9.29□□□□□ -0.92
CHRNA1-205ENST00000409542 M0R143 59 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 OR5AL1P0C617 328 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 RPL35AP18077 110 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 APOC4P55056 127 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 VGLL1Q99990 258 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 TRAV25A0A0B4J276 109 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 C20orf202A1L168 122 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 EREGO14944 169 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 LINC00614P0C842 121 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 NANOS2P60321 138 aaKnown RBP9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 CLEC5AQ9NY25 188 aa9.28□□□□□ -0.92
CHRNA1-205ENST00000409542 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
CHRNA1-205ENST00000409542 HLA-DMBP28068 263 aa9.27□□□□□ -0.93
CHRNA1-205ENST00000409542 ZNF124Q15973 351 aa9.27□□□□□ -0.93
CHRNA1-205ENST00000409542 SPATA45Q537H7 98 aa9.27□□□□□ -0.93
CHRNA1-205ENST00000409542 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
CHRNA1-205ENST00000409542 SNHG12Q9BXW3 62 aa9.27□□□□□ -0.93
CHRNA1-205ENST00000409542 IGHV3OR16-8A0A075B7F1 116 aa9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 CRXO43186 299 aaPredicted RBP9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 IGLC6P0CF74 106 aa9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 IGFL4Q6B9Z1 124 aa9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 Q8TAT8 98 aa9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 TMEM70Q9BUB7 260 aa9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 MAP6D1Q9H9H5 199 aa9.26□□□□□ -0.93
CHRNA1-205ENST00000409542 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 A0A1B0GV90 55 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 FABP5P3A8MUU1 101 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 PRB4P10163 310 aaPredicted RBP9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 ZNF80P51504 273 aaPredicted RBP9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 LINC01559Q495D7 138 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 FAM104BQ5XKR9 115 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 FER1L6-AS1Q8NA97 138 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 KIR2DL5BQ8NHK3 375 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 SPAG8Q99932 426 aaPredicted RBP9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 PPP1R14DQ9NXH3 145 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 UQCR10Q9UDW1 63 aa9.25□□□□□ -0.93
CHRNA1-205ENST00000409542 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 PRAC2D3DTV9 90 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 NDUFA4O00483 81 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 APRG1Q8IVJ8 170 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 GLMPQ8WWB7 406 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 TPPP3Q9BW30 176 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
CHRNA1-205ENST00000409542 TMSB15BA0A087X1C1 80 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 DEFB4AO15263 64 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 HIST1H1AQ02539 215 aaPredicted RBP9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 ERCC8Q13216 396 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 APLNQ9ULZ1 77 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 UFC1Q9Y3C8 167 aa9.23□□□□□ -0.93
CHRNA1-205ENST00000409542 IGHV3-66A0A0C4DH42 116 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 SYS1-DBNDD2H3BUS1 97 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 ZNF207O43670 478 aaKnown RBP9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 ZNF138P52744 262 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 SSTP61278 116 aa9.22□□□□□ -0.93
CHRNA1-205ENST00000409542 NUTF2P61970 127 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms