RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 DEFB4AO15263 64 aa11.83□□□□□ -0.52
TSPAN4-208ENST00000409531 ARMS2P0C7Q2 107 aa11.83□□□□□ -0.52
TSPAN4-208ENST00000409531 ZNF575Q86XF7 245 aa11.83□□□□□ -0.52
TSPAN4-208ENST00000409531 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
TSPAN4-208ENST00000409531 CTDSP1Q9GZU7 261 aa11.83□□□□□ -0.52
TSPAN4-208ENST00000409531 NOP10Q9NPE3 64 aaKnown RBP11.83□□□□□ -0.52
TSPAN4-208ENST00000409531 MUC4Q99102 2169 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 A0A0J9YWU9 116 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 F2Z2F3 143 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 M0R2P5 195 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 OR5AL1P0C617 328 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 GZMBP10144 247 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 LGALS9BQ3B8N2 356 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 PHLDA3Q9Y5J5 127 aa11.82□□□□□ -0.52
TSPAN4-208ENST00000409531 EPPK1P58107 5090 aaKnown RBP11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 A0A087WWC5 75 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 SNAI2O43623 268 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 IGLC6P0CF74 106 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 PTH2Q96A98 100 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 NDUFAF3Q9BU61 184 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 TPPP3Q9BW30 176 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 SSBP4Q9BWG4 385 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 SCRT2Q9NQ03 307 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 DKK2Q9UBU2 259 aa11.81□□□□□ -0.52
TSPAN4-208ENST00000409531 C7orf77A4D0Y5 90 aa11.8□□□□□ -0.52
TSPAN4-208ENST00000409531 SPINK4O60575 86 aa11.8□□□□□ -0.52
TSPAN4-208ENST00000409531 FOXA3P55318 350 aaPredicted RBP11.8□□□□□ -0.52
TSPAN4-208ENST00000409531 PIK3CD-AS1Q5SR53 167 aa11.8□□□□□ -0.52
TSPAN4-208ENST00000409531 FAM222AQ5U5X8 452 aa11.8□□□□□ -0.52
TSPAN4-208ENST00000409531 SYT8Q8NBV8 401 aa11.8□□□□□ -0.52
TSPAN4-208ENST00000409531 TMEM242Q9NWH2 141 aa11.8□□□□□ -0.52
TSPAN4-208ENST00000409531 TRGV1A0A0A0MS02 117 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 CXorf65A6NEN9 183 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 CTRLP40313 264 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 CACNG7P62955 275 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 ZNF876PQ49A33 203 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 ZFP82Q8N141 532 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 RASL10AQ92737 203 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 BORCS7Q96B45 105 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 RPS10P5Q9NQ39 176 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 NAT8BQ9UHF3 227 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 BIRC6Q9NR09 4857 aa11.79□□□□□ -0.52
TSPAN4-208ENST00000409531 DNAH7Q8WXX0 4024 aa11.78□□□□□ -0.52
TSPAN4-208ENST00000409531 SMIM27A0A1W2PRY6 76 aa11.78□□□□□ -0.52
TSPAN4-208ENST00000409531 HIGD1CA8MV81 97 aa11.78□□□□□ -0.52
TSPAN4-208ENST00000409531 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
TSPAN4-208ENST00000409531 WDR73Q6P4I2 378 aa11.78□□□□□ -0.52
TSPAN4-208ENST00000409531 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
TSPAN4-208ENST00000409531 GTSF1Q8WW33 167 aa11.78□□□□□ -0.52
TSPAN4-208ENST00000409531 DAD1P61803 113 aa11.77□□□□□ -0.53
TSPAN4-208ENST00000409531 Q6ZTI0 123 aa11.77□□□□□ -0.53
TSPAN4-208ENST00000409531 IMMP2LQ96T52 175 aa11.77□□□□□ -0.53
TSPAN4-208ENST00000409531 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-208ENST00000409531 CELA1Q9UNI1 258 aa11.77□□□□□ -0.53
TSPAN4-208ENST00000409531 M0R381 172 aa11.76□□□□□ -0.53
TSPAN4-208ENST00000409531 LINC00612Q8N6U2 182 aa11.76□□□□□ -0.53
TSPAN4-208ENST00000409531 OR10AG1Q8NH19 301 aa11.76□□□□□ -0.53
TSPAN4-208ENST00000409531 C11orf45Q8TAV5 145 aa11.76□□□□□ -0.53
TSPAN4-208ENST00000409531 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
TSPAN4-208ENST00000409531 CNFNQ9BYD5 112 aa11.76□□□□□ -0.53
TSPAN4-208ENST00000409531 TRGV2A0A075B6R0 118 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 GAGE12BA1L429 117 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 GAGE7O76087 117 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 NXPH4O95158 308 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 S100A1P23297 94 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 KCNIP4Q6PIL6 250 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 NUP35Q8NFH5 326 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 C18orf15Q96N68 181 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 RYR2Q92736 4967 aa11.75□□□□□ -0.53
TSPAN4-208ENST00000409531 IGHV4-4A0A075B6R2 117 aa11.74□□□□□ -0.53
TSPAN4-208ENST00000409531 A0A1B0GUT8 65 aa11.74□□□□□ -0.53
TSPAN4-208ENST00000409531 A8MWV9 139 aa11.74□□□□□ -0.53
TSPAN4-208ENST00000409531 S100PP25815 95 aa11.74□□□□□ -0.53
TSPAN4-208ENST00000409531 DMRTA1Q5VZB9 504 aa11.74□□□□□ -0.53
TSPAN4-208ENST00000409531 DYNC2H1Q8NCM8 4307 aaKnown RBP11.74□□□□□ -0.53
TSPAN4-208ENST00000409531 MUC21A0A0G2JKD1 596 aa11.73□□□□□ -0.53
TSPAN4-208ENST00000409531 MUC21A0A140T8X8 626 aa11.73□□□□□ -0.53
TSPAN4-208ENST00000409531 ATP6V1G1O75348 118 aa11.73□□□□□ -0.53
TSPAN4-208ENST00000409531 NTF3P20783 257 aa11.73□□□□□ -0.53
TSPAN4-208ENST00000409531 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 TRAV9-1A0A075B6T8 112 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 CIDEAO60543 219 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 TRGC1P0CF51 173 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 SSTP61278 116 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 RIGQ13278 110 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 TWIST1Q15672 202 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
TSPAN4-208ENST00000409531 TENM2Q9NT68 2774 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 A0A1B0GW15 77 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 ATP5G1P05496 136 aa11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 FAM3BP58499 235 aaPredicted RBP11.71□□□□□ -0.53
TSPAN4-208ENST00000409531 C12orf74Q32Q52 190 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms