RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ALKBH7Q9BT30 221 aaPredicted RBP10.3□□□□□ -0.76
GPNMB-203ENST00000409458 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
GPNMB-203ENST00000409458 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
GPNMB-203ENST00000409458 HIST3H2BBQ8N257 126 aa10.29□□□□□ -0.76
GPNMB-203ENST00000409458 TMEM191AQ9H0A3 160 aa10.29□□□□□ -0.76
GPNMB-203ENST00000409458 IFITM10A6NMD0 228 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 M0R381 172 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 Q0VG73 95 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 IQCJQ1A5X6 159 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 SHISA2Q6UWI4 295 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 TMEM256Q8N2U0 113 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 MDFICQ9P1T7 246 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 AMBPP02760 352 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
GPNMB-203ENST00000409458 LINC00310P59036 64 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 GTSCR1Q86UQ5 136 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 DEFB125Q8N687 156 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 C18orf32Q8TCD1 76 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 TMEM158Q8WZ71 300 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 RNF185Q96GF1 192 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 C9orf85Q96MD7 179 aa10.28□□□□□ -0.76
GPNMB-203ENST00000409458 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.77
GPNMB-203ENST00000409458 CBY3A6NI87 242 aa10.27□□□□□ -0.77
GPNMB-203ENST00000409458 NXPH4O95158 308 aa10.27□□□□□ -0.77
GPNMB-203ENST00000409458 EVI2AP22794 236 aa10.27□□□□□ -0.77
GPNMB-203ENST00000409458 MRPL51Q4U2R6 128 aaKnown RBP10.27□□□□□ -0.77
GPNMB-203ENST00000409458 OR10J3Q5JRS4 329 aa10.27□□□□□ -0.77
GPNMB-203ENST00000409458 C20orf144Q9BQM9 153 aa10.27□□□□□ -0.77
GPNMB-203ENST00000409458 MUC4Q99102 2169 aa10.27□□□□□ -0.77
GPNMB-203ENST00000409458 NUPR1O60356 82 aa10.26□□□□□ -0.77
GPNMB-203ENST00000409458 SERF1AO75920 110 aa10.26□□□□□ -0.77
GPNMB-203ENST00000409458 PRM2P04554 102 aa10.26□□□□□ -0.77
GPNMB-203ENST00000409458 GIG44P09565 113 aaPredicted RBP10.26□□□□□ -0.77
GPNMB-203ENST00000409458 NUTF2P61970 127 aaKnown RBP10.26□□□□□ -0.77
GPNMB-203ENST00000409458 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
GPNMB-203ENST00000409458 RCHY1Q96PM5 261 aa10.26□□□□□ -0.77
GPNMB-203ENST00000409458 D6R8Y8 96 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 WIPF1O43516 503 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 HTN1P15515 57 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 RAB4AP20338 218 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 C1orf158Q8N1D5 194 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 LINC01587Q99440 93 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 U3KQK5 164 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 ANK2Q01484 3957 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 SMKR1H3BMG3 65 aa10.25□□□□□ -0.77
GPNMB-203ENST00000409458 NCR2O95944 276 aa10.24□□□□□ -0.77
GPNMB-203ENST00000409458 AKR1D1P51857 326 aa10.24□□□□□ -0.77
GPNMB-203ENST00000409458 SMIM15Q7Z3B0 74 aa10.24□□□□□ -0.77
GPNMB-203ENST00000409458 S100A2P29034 98 aa10.23□□□□□ -0.77
GPNMB-203ENST00000409458 ORMDL3Q8N138 153 aa10.23□□□□□ -0.77
GPNMB-203ENST00000409458 AP1S3Q96PC3 154 aa10.23□□□□□ -0.77
GPNMB-203ENST00000409458 HIST1H2BLQ99880 126 aa10.23□□□□□ -0.77
GPNMB-203ENST00000409458 IGHV3OR16-12A0A075B7B8 117 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 GAS8-AS1O95177 125 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 ESDP10768 282 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 FABP4P15090 132 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 CKS2P33552 79 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 MORN3Q6PF18 240 aaPredicted RBP10.22□□□□□ -0.77
GPNMB-203ENST00000409458 C14orf178Q8N769 122 aaPredicted RBP10.22□□□□□ -0.77
GPNMB-203ENST00000409458 TMEM208Q9BTX3 173 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 ZNF415Q09FC8 603 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 C11orf72Q8NBR9 251 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 PRELID3AQ96N28 172 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 DPH3P1Q9H4G8 78 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 JPT2Q9H910 190 aa10.22□□□□□ -0.77
GPNMB-203ENST00000409458 NOTCH3Q9UM47 2321 aa10.21□□□□□ -0.77
GPNMB-203ENST00000409458 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.78
GPNMB-203ENST00000409458 NPYP01303 97 aa10.21□□□□□ -0.78
GPNMB-203ENST00000409458 SYT8Q8NBV8 401 aa10.21□□□□□ -0.78
GPNMB-203ENST00000409458 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
GPNMB-203ENST00000409458 AZU1P20160 251 aa10.2□□□□□ -0.78
GPNMB-203ENST00000409458 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
GPNMB-203ENST00000409458 CSNK1G2-AS1Q8NCQ2 148 aa10.2□□□□□ -0.78
GPNMB-203ENST00000409458 C1QTNF4Q9BXJ3 329 aa10.2□□□□□ -0.78
GPNMB-203ENST00000409458 GSN-AS1Q9NRJ2 163 aa10.2□□□□□ -0.78
GPNMB-203ENST00000409458 GOLT1BQ9Y3E0 138 aa10.2□□□□□ -0.78
GPNMB-203ENST00000409458 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
GPNMB-203ENST00000409458 PPBPP02775 128 aa10.19□□□□□ -0.78
GPNMB-203ENST00000409458 MGPP08493 103 aa10.19□□□□□ -0.78
GPNMB-203ENST00000409458 RNASEKQ6P5S7 137 aaKnown RBP10.19□□□□□ -0.78
GPNMB-203ENST00000409458 NIT1Q86X76 327 aa10.19□□□□□ -0.78
GPNMB-203ENST00000409458 STAB1Q9NY15 2570 aa10.19□□□□□ -0.78
GPNMB-203ENST00000409458 DNAH3Q8TD57 4116 aa10.19□□□□□ -0.78
GPNMB-203ENST00000409458 A0A087WWL8 130 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 LINC00315P59091 139 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 OR10D4PQ8NGN7 298 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 PACRGQ96M98 296 aaPredicted RBP10.18□□□□□ -0.78
GPNMB-203ENST00000409458 PMCHP20382 165 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 ZNF876PQ49A33 203 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 POM121L12Q8N7R1 296 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
GPNMB-203ENST00000409458 TMEM18Q96B42 140 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 SAMD10Q9BYL1 202 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms