RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 HEATR1Q9H583 2144 aaKnown RBP8.23□□□□□ -1.09
NIF3L1-204ENST00000409357 IGHV3OR15-7A0A075B7D8 119 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 GATA4P43694 442 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 HES1Q14469 280 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 VMA21Q3ZAQ7 101 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 KIR2DL4Q99706 377 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 AAMDCQ9H7C9 122 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 FZR1Q9UM11 496 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 SVEP1Q4LDE5 3571 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 CSPG4Q6UVK1 2322 aa8.22□□□□□ -1.09
NIF3L1-204ENST00000409357 TRAV8-2A0A0B4J237 113 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 LYZL6O75951 148 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 KRTAP1-3Q8IUG1 177 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 ODF3Q96PU9 254 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 PRR25Q96S07 402 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 LINC01587Q99440 93 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 TPPP3Q9BW30 176 aa8.21□□□□□ -1.09
NIF3L1-204ENST00000409357 TNCP24821 2201 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 SMKR1H3BMG3 65 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 M0R2P5 195 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 DUSP14O95147 198 aaKnown RBP8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 IGLV1-44P01699 117 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 ATP5G1P05496 136 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 IGHV1-2P23083 117 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 HOXA4Q00056 320 aaPredicted RBP8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 UTF1Q5T230 341 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 Q6ZT83 130 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 ZNF575Q86XF7 245 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 WFDC3Q8IUB2 231 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 UBTD1Q9HAC8 227 aa8.21□□□□□ -1.1
NIF3L1-204ENST00000409357 IGHV3-64DA0A0J9YX35 117 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 EGR2P11161 476 aaPredicted RBP8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 MRGPRG-AS1Q2M3A8 158 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 DEFB113Q30KQ7 82 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 ORMDL2Q53FV1 153 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 Q8N1Y9 231 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 NRACQ8N912 160 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 ZNRF1Q8ND25 227 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 WFDC11Q8NEX6 87 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 LEAP2Q969E1 77 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 PRO1854Q9UHT4 67 aa8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 CSDC2Q9Y534 153 aaKnown RBP8.2□□□□□ -1.1
NIF3L1-204ENST00000409357 TRAV8-4A0A0B4J246 113 aa8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 CRLF1O75462 422 aa8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 IGHV3-13P01766 116 aa8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 SRSF9Q13242 221 aaKnown RBP eCLIP8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 SLC25A29Q8N8R3 303 aa8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 TOMM6Q96B49 74 aa8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 C8orf49Q96NF6 230 aa8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 SONP18583 2426 aaKnown RBP8.19□□□□□ -1.1
NIF3L1-204ENST00000409357 A0A0B4J2C4 111 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 A0A0J9YY99 117 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 CRYGBP07316 175 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 CFC1P0CG37 223 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 Q71RC1 249 aaPredicted RBP8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 DTX2Q86UW9 622 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 C15orf53Q8NAA6 179 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 PRADC1Q9BSG0 188 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 JMJD1CQ15652 2540 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 TRBV10-2A0A0K0K1G8 114 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 ZNF815PA8K554 130 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 H3BTX0 84 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 LGALS9O00182 355 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 NDUFA3O95167 84 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 RPL27AP46776 148 aaKnown RBP8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 LYZP61626 148 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 BSPH1Q075Z2 132 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 IGFBPL1Q8WX77 278 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 TIMD4Q96H15 378 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 PPDPFQ9H3Y8 114 aa8.18□□□□□ -1.1
NIF3L1-204ENST00000409357 FN1P02751 2386 aaKnown RBP8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 ABCA2Q9BZC7 2435 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 LINC01548A6NM66 108 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 I3L2K1 104 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 ID1P41134 155 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 ERCC8Q13216 396 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 ATXN8Q156A1 80 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 FAM201AQ5SY85 155 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 CCL19Q99731 98 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 ONECUT1Q9UBC0 465 aa8.17□□□□□ -1.1
NIF3L1-204ENST00000409357 H3BT86 120 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 TIMM23O14925 209 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 IGKV1-17P01599 117 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 ACYP1P07311 99 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 HERVK_113P61574 105 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 SCGB1D4Q6XE38 83 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 BAALCQ8WXS3 180 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 GAFA1Q96PS6 74 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 CUBNO60494 3623 aa8.16□□□□□ -1.1
NIF3L1-204ENST00000409357 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.1
NIF3L1-204ENST00000409357 TRAV25A0A0B4J276 109 aa8.15□□□□□ -1.1
NIF3L1-204ENST00000409357 RBAKDNA6NC62 111 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms