RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TREM1Q9NP99 234 aa6.14□□□□□ -1.43
NIF3L1-203ENST00000409129 TRAV8-1A0A0A6YYK1 113 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 TRAV8-6A0A0B4J262 113 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 A0A1W2PPV4 95 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 FBLL1A6NHQ2 334 aaKnown RBP6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 F6UZH7 168 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 CIDEAO60543 219 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 SRSF3P84103 164 aaKnown RBP6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 ACOT6Q3I5F7 207 aaPredicted RBP6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 Q5BKY6 102 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 SLC25A29Q8N8R3 303 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 ASB13Q8WXK3 278 aa6.13□□□□□ -1.43
NIF3L1-203ENST00000409129 FXYD6-FXYD2A0A087WZ82 144 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 TRBV6-4A0A1B0GX49 114 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 RS1O15537 224 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 GIPP09681 153 aaPredicted RBP6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 GNG5P63218 68 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 ZNF876PQ49A33 203 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 OR10J3Q5JRS4 329 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 SERTAD4-AS1Q5TG53 156 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 CFAP126Q5VTH2 177 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 Q6ZSN1 163 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 Q8N814 137 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 SYT8Q8NBV8 401 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 PRADC1Q9BSG0 188 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 Q9HAA7 133 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 WFDC1Q9HC57 220 aa6.12□□□□□ -1.43
NIF3L1-203ENST00000409129 FAT3Q8TDW7 4589 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 SMLR1H3BR10 107 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 TAAR5O14804 337 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 IGHV3-30P01768 117 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 IGHV3-33P01772 117 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 IGHV3-30-3P0DP02 117 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 IGHV3-30-5P0DP03 117 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 RAB2AP61019 212 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 RHOHQ15669 191 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 LELP1Q5T871 98 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 DPPA3Q6W0C5 159 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 OR10G9Q8NGN4 311 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 OR10G7Q8NGN6 311 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 OR2T35Q8NGX2 323 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 SGK494Q96LW2 274 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 NDFIP1Q9BT67 221 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 C11orf21Q9P2W6 132 aa6.11□□□□□ -1.43
NIF3L1-203ENST00000409129 IGHV3-73A0A0B4J1V6 119 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 SERTM2A0A1B0GWG4 89 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 HMGB3O15347 200 aaKnown RBP6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 ATP6V1G1O75348 118 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 C1QBP02746 253 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 ZNF80P51504 273 aaPredicted RBP6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 ATP6V0E2Q8NHE4 81 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 PTH2Q96A98 100 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 C9orf85Q96MD7 179 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 TM2D2Q9BX73 214 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 GTSF1LQ9H1H1 148 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 FAM30AQ9NZY2 134 aa6.1□□□□□ -1.43
NIF3L1-203ENST00000409129 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 G3V3Q6 166 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 K7EQM0 130 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 GCGP01275 180 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 TCRAP04437 139 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 ARL14EPLP0DKL9 152 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 MGST1P10620 155 aaKnown RBP6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 LAGE3Q14657 143 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 ZNF506Q5JVG8 444 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 C5orf17Q8NAS9 161 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 SUN5Q8TC36 379 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 PSG8Q9UQ74 426 aa6.09□□□□□ -1.43
NIF3L1-203ENST00000409129 hCG_2014768A0A024R1R8 64 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 RNF222A6NCQ9 220 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 IGLV2-11P01706 119 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 STAG3L2P0CL84 134 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 STAG3L3P0CL85 134 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 RNASE3P12724 160 aaKnown RBP6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 CDC34P49427 236 aaPredicted RBP6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 SMUG1Q53HV7 270 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 TMEM75Q8N9X5 138 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 HSD17B11Q8NBQ5 300 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 AQP10Q96PS8 301 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 SH3BGRL3Q9H299 93 aa6.08□□□□□ -1.44
NIF3L1-203ENST00000409129 ARPC5O15511 151 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 GCHFRP30047 84 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 FLI1Q01543 452 aaPredicted RBP6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 WFDC2Q14508 124 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 ZFP69Q49AA0 526 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 ZFP2Q6ZN57 461 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 PRNTQ86SH4 94 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 INO80EQ8NBZ0 244 aaPredicted RBP6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 OR2G3Q8NGZ4 309 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 RAB24Q969Q5 203 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 EPDR1Q9UM22 224 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 TNFSF18Q9UNG2 199 aa6.07□□□□□ -1.44
NIF3L1-203ENST00000409129 TRAV8-3A0A0A6YYJ7 113 aa6.06□□□□□ -1.44
NIF3L1-203ENST00000409129 GAGE12JA6NER3 117 aa6.06□□□□□ -1.44
NIF3L1-203ENST00000409129 A8MWV9 139 aa6.06□□□□□ -1.44
NIF3L1-203ENST00000409129 PLA2G1BP04054 148 aaKnown RBP6.06□□□□□ -1.44
NIF3L1-203ENST00000409129 GAGE1Q13065 139 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms