RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 ZNF22P17026 224 aaPredicted RBP9.75□□□□□ -0.85
HERC3-203ENST00000407637 LY6DQ14210 128 aa9.75□□□□□ -0.85
HERC3-203ENST00000407637 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
HERC3-203ENST00000407637 WNK2Q9Y3S1 2297 aa9.75□□□□□ -0.85
HERC3-203ENST00000407637 MGAQ8IWI9 3026 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 RNF223E7ERA6 249 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 H7C423 109 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 IGHV3-23P01764 117 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 CD59P13987 128 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 EBI3Q14213 229 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 MUSTN1Q8IVN3 82 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 C8orf31Q8N9H6 132 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 J3QQQ9 107 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 DLX6P56179 175 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 ZNF474Q6S9Z5 364 aaPredicted RBP9.74□□□□□ -0.85
HERC3-203ENST00000407637 PRSS33Q8NF86 280 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 PKDREJQ9NTG1 2253 aa9.74□□□□□ -0.85
HERC3-203ENST00000407637 TACC2O95359 2948 aa9.73□□□□□ -0.85
HERC3-203ENST00000407637 LGALS3P17931 250 aaKnown RBP9.73□□□□□ -0.85
HERC3-203ENST00000407637 LYPD2Q6UXB3 125 aa9.73□□□□□ -0.85
HERC3-203ENST00000407637 MSRB2Q9Y3D2 182 aa9.73□□□□□ -0.85
HERC3-203ENST00000407637 CEP250Q9BV73 2442 aa9.73□□□□□ -0.85
HERC3-203ENST00000407637 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
HERC3-203ENST00000407637 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
HERC3-203ENST00000407637 LRRC75A-AS1Q8N1F1 130 aa9.73□□□□□ -0.85
HERC3-203ENST00000407637 MUC3AQ02505 3323 aa9.72□□□□□ -0.85
HERC3-203ENST00000407637 IGHV1-3A0A0C4DH29 117 aa9.72□□□□□ -0.85
HERC3-203ENST00000407637 IGHV1-8P0DP01 117 aa9.72□□□□□ -0.85
HERC3-203ENST00000407637 M0R381 172 aa9.72□□□□□ -0.85
HERC3-203ENST00000407637 MGPP08493 103 aa9.72□□□□□ -0.85
HERC3-203ENST00000407637 ZNRF2Q8NHG8 242 aa9.72□□□□□ -0.85
HERC3-203ENST00000407637 TP53TG1Q9Y2A0 90 aa9.72□□□□□ -0.85
HERC3-203ENST00000407637 RP1L1Q8IWN7 2480 aaPredicted RBP9.72□□□□□ -0.85
HERC3-203ENST00000407637 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.85
HERC3-203ENST00000407637 IGHV3-35A0A0C4DH35 117 aa9.71□□□□□ -0.85
HERC3-203ENST00000407637 F8W735 103 aaPredicted RBP9.71□□□□□ -0.85
HERC3-203ENST00000407637 PATE3B3GLJ2 98 aa9.71□□□□□ -0.86
HERC3-203ENST00000407637 UQCRQO14949 82 aa9.71□□□□□ -0.86
HERC3-203ENST00000407637 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
HERC3-203ENST00000407637 IGF2-ASQ6U949 168 aa9.71□□□□□ -0.86
HERC3-203ENST00000407637 AGPAT4-IT1Q9H0P7 198 aa9.71□□□□□ -0.86
HERC3-203ENST00000407637 LINC00527Q9UJ94 153 aa9.71□□□□□ -0.86
HERC3-203ENST00000407637 TRBV30A0A0K0K1B3 111 aa9.7□□□□□ -0.86
HERC3-203ENST00000407637 NDUFB3O43676 98 aa9.7□□□□□ -0.86
HERC3-203ENST00000407637 LOXP28300 417 aaPredicted RBP9.7□□□□□ -0.86
HERC3-203ENST00000407637 METTL26Q96S19 204 aa9.7□□□□□ -0.86
HERC3-203ENST00000407637 COL27A1Q8IZC6 1860 aaPredicted RBP9.7□□□□□ -0.86
HERC3-203ENST00000407637 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
HERC3-203ENST00000407637 MFAP4P55083 255 aa9.7□□□□□ -0.86
HERC3-203ENST00000407637 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
HERC3-203ENST00000407637 CLEC2BQ92478 149 aa9.7□□□□□ -0.86
HERC3-203ENST00000407637 H3BT86 120 aa9.69□□□□□ -0.86
HERC3-203ENST00000407637 ATP1A1-AS1Q5TC04 95 aa9.69□□□□□ -0.86
HERC3-203ENST00000407637 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
HERC3-203ENST00000407637 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
HERC3-203ENST00000407637 WIPF1O43516 503 aa9.69□□□□□ -0.86
HERC3-203ENST00000407637 A0A1B0GX51 115 aa9.69□□□□□ -0.86
HERC3-203ENST00000407637 ADIPOQQ15848 244 aa9.69□□□□□ -0.86
HERC3-203ENST00000407637 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
HERC3-203ENST00000407637 POLEQ07864 2286 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 IGIPA6NJ69 53 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 UBE2E1P51965 193 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 IGHV3-66A0A0C4DH42 116 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 A0A0G2JNJ9 132 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 TMEM223A0PJW6 202 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 C17orf100A8MU93 164 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 DEFB121Q5J5C9 76 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 IGFBPL1Q8WX77 278 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 DPH3P1Q9H4G8 78 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 Q9UFV3 132 aa9.68□□□□□ -0.86
HERC3-203ENST00000407637 CDX4O14627 284 aaPredicted RBP9.67□□□□□ -0.86
HERC3-203ENST00000407637 EEF1AKMT3Q96AZ1 226 aa9.67□□□□□ -0.86
HERC3-203ENST00000407637 ZNF883P0CG24 379 aa9.67□□□□□ -0.86
HERC3-203ENST00000407637 COX7A1P24310 79 aa9.67□□□□□ -0.86
HERC3-203ENST00000407637 PRR9Q5T870 116 aa9.67□□□□□ -0.86
HERC3-203ENST00000407637 OR13C6PQ8NH95 151 aa9.67□□□□□ -0.86
HERC3-203ENST00000407637 IMUPQ9GZP8 106 aa9.67□□□□□ -0.86
HERC3-203ENST00000407637 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.66□□□□□ -0.86
HERC3-203ENST00000407637 Q6ZSV7 163 aa9.66□□□□□ -0.86
HERC3-203ENST00000407637 CCL17Q92583 94 aa9.66□□□□□ -0.86
HERC3-203ENST00000407637 IGLV11-55A0A075B6I3 123 aa9.66□□□□□ -0.86
HERC3-203ENST00000407637 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
HERC3-203ENST00000407637 BUB1B-PAK6H3BSN5 160 aa9.66□□□□□ -0.86
HERC3-203ENST00000407637 IGLV1-47P01700 117 aa9.66□□□□□ -0.86
HERC3-203ENST00000407637 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
HERC3-203ENST00000407637 TMEM219Q86XT9 240 aa9.65□□□□□ -0.86
HERC3-203ENST00000407637 ZNF580Q9UK33 172 aa9.65□□□□□ -0.86
HERC3-203ENST00000407637 BOD1L1Q8NFC6 3051 aa9.65□□□□□ -0.86
HERC3-203ENST00000407637 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.87
HERC3-203ENST00000407637 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.87
HERC3-203ENST00000407637 TRAV17A0A0B4J275 112 aa9.65□□□□□ -0.87
HERC3-203ENST00000407637 LEPROTO15243 131 aa9.65□□□□□ -0.87
HERC3-203ENST00000407637 IGHG3P01860 377 aa9.65□□□□□ -0.87
HERC3-203ENST00000407637 GAGE2AQ6NT46 116 aa9.65□□□□□ -0.87
HERC3-203ENST00000407637 GPHB5Q86YW7 130 aa9.65□□□□□ -0.87
HERC3-203ENST00000407637 ZNF256Q9Y2P7 627 aaPredicted RBP9.65□□□□□ -0.87
HERC3-203ENST00000407637 TRAV41A0A0B4J266 112 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms