RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 LGALSLQ3ZCW2 172 aaPredicted RBP3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 NRARPQ7Z6K4 114 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 C15orf56Q8N910 161 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 SUN5Q8TC36 379 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 TMED6Q8WW62 240 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 TVP23CQ96ET8 276 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 CNBD2Q96M20 576 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 SCGB3A2Q96PL1 93 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 PRRT1Q99946 306 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 CHCHD5Q9BSY4 110 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 GGACTQ9BVM4 153 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 SLC25A2Q9BXI2 301 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 KRTAP4-1Q9BYQ7 146 aa3.16□□□□□ -1.9
SPTLC1P2-201ENST00000407089 TRBV7-3A0A075B6L6 115 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 FAM25AB3EWG3 89 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 FAM25CB3EWG5 89 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 FAM25GB3EWG6 89 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 F6UZH7 168 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 H0Y9J4 135 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 PTTG1O95997 202 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MT-ND6P03923 174 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 IGLV7-43P04211 117 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 AKAIN1P0CW23 69 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 GZMBP10144 247 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RPL13AP40429 203 aaKnown RBP3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RPL29P47914 159 aaKnown RBP3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RAB5CP51148 216 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 UBE2D1P51668 147 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RANP62826 216 aaKnown RBP3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 SSBP1Q04837 148 aaKnown RBP3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 REG3AQ06141 175 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 C1orf137Q5JT78 98 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 PIK3CD-AS1Q5SR53 167 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 LCE2CQ5TA81 110 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 CLVS1Q8IUQ0 354 aaPredicted RBP3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 DYNC2LI1Q8TCX1 351 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 FAM167A-AS1Q96KT0 104 aa3.15□□□□□ -1.91
SPTLC1P2-201ENST00000407089 TRAV8-4A0A0B4J246 113 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 A0A1W2PNN7 141 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 SSSCA1O60232 199 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 P01737 135 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 ZNF80P51504 273 aaPredicted RBP3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 PKIAP61925 76 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 LSM3P62310 102 aaKnown RBP3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RPL36AP83881 106 aaKnown RBP3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 GAGE6Q13070 117 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 TPRXLQ17RH7 258 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 CFAP161Q6P656 301 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 ARL6IP6Q8N6S5 226 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 C15orf40Q8WUR7 153 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RPL36ALQ969Q0 106 aaKnown RBP3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 FXYD5Q96DB9 178 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 PHYHIPLQ96FC7 376 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RABL2AQ9UBK7 228 aaPredicted RBP3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 EXTL2Q9UBQ6 330 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 SCP2D1Q9UJQ7 156 aa3.14□□□□□ -1.91
SPTLC1P2-201ENST00000407089 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 TSC22D2O75157 780 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MBPP02686 304 aaPredicted RBP3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 CFC1BP0CG36 223 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 LORP23490 312 aaPredicted RBP3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 TAS2R30P59541 319 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 S100A10P60903 97 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 HIGD2BQ4VC39 106 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 TMEM128Q5BJH2 165 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 GCSAMLQ5JQS6 135 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 NTM-AS1Q6ZSK4 140 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MIR17HGQ75NE6 70 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 DIRAS2Q96HU8 199 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 HYLS1Q96M11 299 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 BCL7BQ9BQE9 202 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 SLIRPQ9GZT3 109 aaKnown RBP3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 WDR83OSQ9Y284 106 aa3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 CARHSP1Q9Y2V2 147 aaKnown RBP3.13□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RHODO00212 210 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 SFT2D2O95562 160 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 AMTP48728 403 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MT1HP80294 61 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 CYCSP99999 105 aaKnown RBP3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 FAM74A4Q5TZK3 123 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 OR10G8Q8NGN5 311 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MITD1Q8WV92 249 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RETNLBQ9BQ08 111 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MLST8Q9BVC4 326 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 NMES1Q9C002 83 aa3.12□□□□□ -1.91
SPTLC1P2-201ENST00000407089 IGLV7-46A0A075B6I9 117 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 ANKRD20A5PA0PJZ0 165 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 C7orf66A4D0T2 115 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 GAGE12HA6NDE8 117 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 PTTG1IPP53801 180 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 KRTAP10-6P60371 365 aaPredicted RBP3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 RAB2AP61019 212 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MRPS10P82664 201 aaKnown RBP3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 SPCS2Q15005 226 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 NEDD8Q15843 81 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 ASB16-AS1Q495Z4 193 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 PRR27Q6MZM9 219 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 MZT2AQ6P582 158 aa3.11□□□□□ -1.91
SPTLC1P2-201ENST00000407089 GOLT1AQ6ZVE7 132 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms