RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ADAMTS20P59510 1910 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 GAGE12JA6NER3 117 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 GAGE4Q13068 117 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 GAGE5Q13069 117 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 GAGE7O76087 117 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 GAGE12FP0CL80 117 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 GAGE12GP0CL81 117 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 GAGE12IP0CL82 117 aa10.48□□□□□ -0.73
SNED1-205ENST00000405547 Q6ZVH6 145 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 DSCR8Q96T75 97 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 IGKV1-17P01599 117 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 IGLV2-14P01704 120 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 I3L2K1 104 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 ACYP1P07311 99 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 GTSF1Q8WW33 167 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 C11orf1Q9H5F2 150 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 K7EIM0 57 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 PLA2G2CQ5R387 149 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 EP400Q96L91 3159 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 TRACP01848 142 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 PRR30Q53SZ7 412 aaPredicted RBP10.47□□□□□ -0.73
SNED1-205ENST00000405547 NPBQ8NG41 125 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 CFHR4Q92496 578 aa10.47□□□□□ -0.73
SNED1-205ENST00000405547 IGFBPL1Q8WX77 278 aa10.46□□□□□ -0.73
SNED1-205ENST00000405547 HIVEP2P31629 2446 aa10.46□□□□□ -0.74
SNED1-205ENST00000405547 J3QLI3 93 aa10.46□□□□□ -0.74
SNED1-205ENST00000405547 ANKRD39Q53RE8 183 aa10.46□□□□□ -0.74
SNED1-205ENST00000405547 CDK2AP2O75956 126 aa10.46□□□□□ -0.74
SNED1-205ENST00000405547 RPL32P62910 135 aaKnown RBP10.45□□□□□ -0.74
SNED1-205ENST00000405547 GAGE6Q13070 117 aa10.45□□□□□ -0.74
SNED1-205ENST00000405547 CR1LQ2VPA4 569 aa10.45□□□□□ -0.74
SNED1-205ENST00000405547 CTSZQ9UBR2 303 aa10.45□□□□□ -0.74
SNED1-205ENST00000405547 ZNF561-AS1K7EIQ3 104 aa10.45□□□□□ -0.74
SNED1-205ENST00000405547 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
SNED1-205ENST00000405547 IGLL5B9A064 214 aa10.45□□□□□ -0.74
SNED1-205ENST00000405547 C22orf46C9J442 243 aa10.45□□□□□ -0.74
SNED1-205ENST00000405547 HOXB4P17483 251 aaPredicted RBP10.45□□□□□ -0.74
SNED1-205ENST00000405547 GNRH2O43555 120 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 LINC00173Q6ZV60 143 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 IGLV11-55A0A075B6I3 123 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 NTN5Q8WTR8 489 aaPredicted RBP10.44□□□□□ -0.74
SNED1-205ENST00000405547 PTPRSQ13332 1948 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 PATE2Q6UY27 113 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 HERV-K104P63124 156 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 TEN1Q86WV5 123 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 IGHV3-38A0A0C4DH36 116 aa10.44□□□□□ -0.74
SNED1-205ENST00000405547 CTRLP40313 264 aa10.43□□□□□ -0.74
SNED1-205ENST00000405547 ELANEP08246 267 aa10.43□□□□□ -0.74
SNED1-205ENST00000405547 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
SNED1-205ENST00000405547 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
SNED1-205ENST00000405547 TAX1BP3O14907 124 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 BUB3O43684 328 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 RNF152Q8N8N0 203 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 IGKV1OR2-108A0A075B7D4 117 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 TRBV6-1A0A0K0K1D8 114 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
SNED1-205ENST00000405547 CFHR3Q02985 330 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 RNASE8Q8TDE3 154 aaKnown RBP10.42□□□□□ -0.74
SNED1-205ENST00000405547 TRAV12-1A0A0B4J245 112 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 RPL39LQ96EH5 51 aaKnown RBP10.42□□□□□ -0.74
SNED1-205ENST00000405547 IGFL2Q6UWQ7 119 aa10.42□□□□□ -0.74
SNED1-205ENST00000405547 DAD1P61803 113 aa10.41□□□□□ -0.74
SNED1-205ENST00000405547 HAMPP81172 84 aa10.41□□□□□ -0.74
SNED1-205ENST00000405547 BAALC-AS2P0C853 105 aa10.41□□□□□ -0.74
SNED1-205ENST00000405547 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
SNED1-205ENST00000405547 FXYD2P54710 66 aa10.4□□□□□ -0.74
SNED1-205ENST00000405547 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
SNED1-205ENST00000405547 IGHV7-81A0A0B4J1V7 117 aa10.4□□□□□ -0.74
SNED1-205ENST00000405547 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
SNED1-205ENST00000405547 Q9H8V8 135 aa10.4□□□□□ -0.74
SNED1-205ENST00000405547 CTSGP08311 255 aa10.4□□□□□ -0.74
SNED1-205ENST00000405547 SPRNQ5BIV9 151 aa10.4□□□□□ -0.74
SNED1-205ENST00000405547 CRYBA4P53673 196 aa10.4□□□□□ -0.75
SNED1-205ENST00000405547 RNASE13Q5GAN3 156 aaKnown RBP10.4□□□□□ -0.75
SNED1-205ENST00000405547 CITED1Q99966 193 aa10.4□□□□□ -0.75
SNED1-205ENST00000405547 F5H768 121 aa10.4□□□□□ -0.75
SNED1-205ENST00000405547 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 CRLF1O75462 422 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 C9orf47Q6ZRZ4 202 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 E9PLD3 99 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 PIP4P1Q86T03 277 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 RITA1Q96K30 269 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 WI2-2373I1.2A0A1W2PRP0 233 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 ODF1Q14990 250 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 WFDC2Q14508 124 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 NKAPP1Q8N9T2 125 aa10.39□□□□□ -0.75
SNED1-205ENST00000405547 COL5A1P20908 1838 aaPredicted RBP10.39□□□□□ -0.75
SNED1-205ENST00000405547 RAI1Q7Z5J4 1906 aaPredicted RBP10.38□□□□□ -0.75
SNED1-205ENST00000405547 G3V4G9 280 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 P0C879 139 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 SPATA12Q7Z6I5 190 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 COL4A4P53420 1690 aaPredicted RBP10.38□□□□□ -0.75
SNED1-205ENST00000405547 A4D1N5 150 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 PSCAO43653 123 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 APOC4P55056 127 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 ODF3L1Q8IXM7 274 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 B5MCH6 92 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 TOMM6Q96B49 74 aa10.38□□□□□ -0.75
SNED1-205ENST00000405547 C19orf71A6NCJ1 209 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms