RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 C1orf122Q6ZSJ8 110 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 TOMM6Q96B49 74 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 MRAP2Q96G30 205 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 CCDC140Q96MF4 163 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 LINC01619G3V211 115 aa11.81□□□□□ -0.52
ATG4B-205ENST00000404914 HIVEP3Q5T1R4 2406 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 PRB1P04280 392 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 CD3EP07766 207 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 SPINK8P0C7L1 97 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 COX6B1P14854 86 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 GATA3P23771 443 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 UBE2D1P51668 147 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 C14orf178Q8N769 122 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-205ENST00000404914 DLX4Q92988 240 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-205ENST00000404914 IGHV4-4A0A075B6R2 117 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 G3V318 75 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
ATG4B-205ENST00000404914 C2orf66Q6UXQ4 117 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 VMO1Q7Z5L0 202 aa11.8□□□□□ -0.52
ATG4B-205ENST00000404914 SCGB2A2Q13296 93 aa11.79□□□□□ -0.52
ATG4B-205ENST00000404914 SCGB1D4Q6XE38 83 aa11.79□□□□□ -0.52
ATG4B-205ENST00000404914 C20orf173Q96LM9 149 aa11.79□□□□□ -0.52
ATG4B-205ENST00000404914 FLNCQ14315 2725 aa11.79□□□□□ -0.52
ATG4B-205ENST00000404914 Q8N9W7 124 aa11.79□□□□□ -0.52
ATG4B-205ENST00000404914 MUC4Q99102 2169 aa11.79□□□□□ -0.52
ATG4B-205ENST00000404914 CRYGDP07320 174 aa11.78□□□□□ -0.52
ATG4B-205ENST00000404914 CD7P09564 240 aa11.78□□□□□ -0.52
ATG4B-205ENST00000404914 Q6ZS46 218 aa11.78□□□□□ -0.52
ATG4B-205ENST00000404914 SLC50A1Q9BRV3 221 aa11.78□□□□□ -0.52
ATG4B-205ENST00000404914 ZNF462Q96JM2 2506 aa11.78□□□□□ -0.52
ATG4B-205ENST00000404914 DUSP14O95147 198 aaKnown RBP11.78□□□□□ -0.52
ATG4B-205ENST00000404914 SRSF9Q13242 221 aaKnown RBP eCLIP11.78□□□□□ -0.522e-8■■■□□ 15
ATG4B-205ENST00000404914 Q6ZUT4 128 aa11.78□□□□□ -0.52
ATG4B-205ENST00000404914 KIR2DL4Q99706 377 aa11.78□□□□□ -0.52
ATG4B-205ENST00000404914 ATP6V0E1O15342 81 aa11.77□□□□□ -0.52
ATG4B-205ENST00000404914 TCL1BO95988 128 aa11.77□□□□□ -0.52
ATG4B-205ENST00000404914 PRTN3P24158 256 aa11.77□□□□□ -0.52
ATG4B-205ENST00000404914 UBE2D3P61077 147 aa11.77□□□□□ -0.53
ATG4B-205ENST00000404914 UBE2D2P62837 147 aa11.77□□□□□ -0.53
ATG4B-205ENST00000404914 C11orf86A6NJI1 115 aa11.77□□□□□ -0.53
ATG4B-205ENST00000404914 TSHBP01222 138 aa11.77□□□□□ -0.53
ATG4B-205ENST00000404914 MGPP08493 103 aa11.77□□□□□ -0.53
ATG4B-205ENST00000404914 TSPEAR-AS2P59090 65 aa11.77□□□□□ -0.53
ATG4B-205ENST00000404914 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
ATG4B-205ENST00000404914 ORMDL2Q53FV1 153 aa11.76□□□□□ -0.53
ATG4B-205ENST00000404914 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
ATG4B-205ENST00000404914 AKAP6Q13023 2319 aa11.75□□□□□ -0.53
ATG4B-205ENST00000404914 ATP6V0E2Q8NHE4 81 aa11.75□□□□□ -0.53
ATG4B-205ENST00000404914 IGLV4-69A0A075B6H9 119 aa11.75□□□□□ -0.53
ATG4B-205ENST00000404914 NDUFA11Q86Y39 141 aa11.75□□□□□ -0.53
ATG4B-205ENST00000404914 FAM110DQ8TAY7 271 aaPredicted RBP11.74□□□□□ -0.53
ATG4B-205ENST00000404914 A0A0J9YY99 117 aa11.74□□□□□ -0.53
ATG4B-205ENST00000404914 ZFAND2AQ8N6M9 145 aa11.74□□□□□ -0.53
ATG4B-205ENST00000404914 RNF183Q96D59 192 aa11.74□□□□□ -0.53
ATG4B-205ENST00000404914 GNRH2O43555 120 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 ZFP36P26651 326 aaKnown RBP11.73□□□□□ -0.53
ATG4B-205ENST00000404914 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 EBI3Q14213 229 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 ANXA2RQ3ZCQ2 193 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 C16orf92Q96LL3 132 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 MYO18BQ8IUG5 2567 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 FAM208BQ5VWN6 2430 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 FAM90A27PA6NNH2 459 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 M0R1W7 72 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 CFC1BP0CG36 223 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 CFC1P0CG37 223 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 RPL39P62891 51 aaKnown RBP11.73□□□□□ -0.53
ATG4B-205ENST00000404914 GPHB5Q86YW7 130 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 LINC00527Q9UJ94 153 aa11.73□□□□□ -0.53
ATG4B-205ENST00000404914 F6UB75 175 aa11.72□□□□□ -0.53
ATG4B-205ENST00000404914 JPT2Q9H910 190 aa11.72□□□□□ -0.53
ATG4B-205ENST00000404914 EIF4EBP3O60516 100 aaPredicted RBP11.72□□□□□ -0.53
ATG4B-205ENST00000404914 TEN1Q86WV5 123 aa11.72□□□□□ -0.53
ATG4B-205ENST00000404914 DPH3P1Q9H4G8 78 aa11.72□□□□□ -0.53
ATG4B-205ENST00000404914 CRIP2P52943 208 aaPredicted RBP11.71□□□□□ -0.53
ATG4B-205ENST00000404914 CDSNQ15517 529 aa11.71□□□□□ -0.53
ATG4B-205ENST00000404914 ANKRD29Q8N6D5 301 aa11.71□□□□□ -0.53
ATG4B-205ENST00000404914 METTL26Q96S19 204 aa11.71□□□□□ -0.53
ATG4B-205ENST00000404914 UTP20O75691 2785 aaKnown RBP11.71□□□□□ -0.53
ATG4B-205ENST00000404914 S100A4P26447 101 aaKnown RBP11.71□□□□□ -0.54
ATG4B-205ENST00000404914 ARL3P36405 182 aa11.71□□□□□ -0.54
ATG4B-205ENST00000404914 PPDPFLQ8WWR9 84 aa11.71□□□□□ -0.54
ATG4B-205ENST00000404914 AJUBAQ96IF1 538 aa11.71□□□□□ -0.54
ATG4B-205ENST00000404914 PHLDA3Q9Y5J5 127 aa11.71□□□□□ -0.54
ATG4B-205ENST00000404914 ITLN2Q8WWU7 325 aaPredicted RBP11.7□□□□□ -0.54
ATG4B-205ENST00000404914 TP53TG1Q9Y2A0 90 aa11.7□□□□□ -0.54
ATG4B-205ENST00000404914 U3KQE9 123 aa11.7□□□□□ -0.54
ATG4B-205ENST00000404914 IGHV3-30P01768 117 aa11.69□□□□□ -0.54
ATG4B-205ENST00000404914 IGHV3-30-5P0DP03 117 aa11.69□□□□□ -0.54
ATG4B-205ENST00000404914 RNASE3P12724 160 aaKnown RBP11.69□□□□□ -0.54
ATG4B-205ENST00000404914 USP9XQ93008 2570 aaPredicted RBP11.69□□□□□ -0.54
ATG4B-205ENST00000404914 CENPVL3A0A0U1RRI6 287 aa11.69□□□□□ -0.54
ATG4B-205ENST00000404914 ZNRF2Q8NHG8 242 aa11.69□□□□□ -0.54
ATG4B-205ENST00000404914 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
ATG4B-205ENST00000404914 TRBV12-3P01733 135 aa11.69□□□□□ -0.54
ATG4B-205ENST00000404914 UNQ9165/PRO28630Q6UXU0 137 aa11.69□□□□□ -0.54
ATG4B-205ENST00000404914 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
ATG4B-205ENST00000404914 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
ATG4B-205ENST00000404914 AMELXQ99217 191 aa11.68□□□□□ -0.54
ATG4B-205ENST00000404914 IGIPA6NJ69 53 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms