RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PEX7O00628 323 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 NXPH4O95158 308 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 GYPEP15421 78 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 SMUG1Q53HV7 270 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 SOHLH1Q5JUK2 328 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 DPPA3Q6W0C5 159 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 Q86TA4 180 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZNF575Q86XF7 245 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 OR4C5Q8NGB2 326 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 FAM213BQ8TBF2 198 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 RASL10AQ92737 203 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 KCNS1Q96KK3 526 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 UPK3BQ9BT76 320 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZNF471Q9BX82 626 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 ARL2-SNX15V9GYD0 113 aa3.96□□□□□ -1.78
HMGB1P20-201ENST00000402555 IGHV3-73A0A0B4J1V6 119 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 TRAV4A0A0B4J268 109 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 KANTRA0A1W2PQU2 76 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 K7EQD1 137 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 BCL2L11O43521 198 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 PFN1P07737 140 aaKnown RBP3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 SRIP30626 198 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZNF345Q14585 488 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 MRPL23Q16540 153 aaKnown RBP3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZFP69Q49AA0 526 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 SAPCD1Q5SSQ6 148 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 CST9LP1Q5W188 147 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 LYPD5Q6UWN5 251 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 TMUB2Q71RG4 321 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 SFT2D1Q8WV19 159 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZC2HC1AQ96GY0 325 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 C9orf85Q96MD7 179 aa3.95□□□□□ -1.78
HMGB1P20-201ENST00000402555 RYR1P21817 5038 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 IGKV3D-20A0A0C4DH25 116 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 A0A0D9SG52 128 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 GRIFINA4D1Z8 144 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 PGPEP1LA6NFU8 196 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 HMSDA8MTL9 139 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 M0R036 132 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 SIVA1O15304 175 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 RS1O15537 224 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 PAGE4O60829 102 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 PFDN1O60925 122 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 SEC11BP0C7V7 166 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 RNASE3P12724 160 aaKnown RBP3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 GATA1P15976 413 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 CRIP1P50238 77 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 PPT1P50897 306 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 SLAQ13239 276 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZNF876PQ49A33 203 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 TTC32Q5I0X7 151 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZNF506Q5JVG8 444 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 CFAP126Q5VTH2 177 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 NEGR1Q7Z3B1 354 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 WFDC10BQ8IUB3 73 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 NHLRC2Q8NBF2 726 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 STOML3Q8TAV4 291 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 PCNPQ8WW12 178 aaKnown RBP3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 HIST1H2BAQ96A08 127 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 TNFRSF18Q9Y5U5 241 aa3.94□□□□□ -1.78
HMGB1P20-201ENST00000402555 LRP1BQ9NZR2 4599 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 TMSB15BA0A087X1C1 80 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 FBLL1A6NHQ2 334 aaKnown RBP3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 FABP5P3A8MUU1 101 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 B4DEV8 164 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 H3BVH4 76 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 SH2D1AO60880 128 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 ORM1P02763 201 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 S100A4P26447 101 aaKnown RBP3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 ASIPP42127 132 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 AKR1C3P42330 323 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 LINC00315P59091 139 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 UBE2G1P62253 170 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 Q6ZSN1 163 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 SLC25A29Q8N8R3 303 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 MBD3L1Q8WWY6 194 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 FMC1Q96HJ9 113 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 NKX6-2Q9C056 277 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 JPT2Q9H910 190 aa3.93□□□□□ -1.78
HMGB1P20-201ENST00000402555 DNAH5Q8TE73 4624 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 hCG_2014768A0A024R1R8 64 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 A0A1W2PPQ1 181 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 UMAD1C9J7I0 102 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 KRBOX1C9JBD0 128 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 LTAP01374 205 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 ARMS2P0C7Q2 107 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 TPT1P13693 172 aaKnown RBP3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 FUSP35637 526 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 CCL20P78556 96 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 LGALSLQ3ZCW2 172 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 Q6ZRN7 208 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 TXNDC17Q9BRA2 123 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 SAMD10Q9BYL1 202 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 Q9UF83 564 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 ZFP30Q9Y2G7 519 aa3.92□□□□□ -1.78
HMGB1P20-201ENST00000402555 TRBV6-1A0A0K0K1D8 114 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 GAGE12JA6NER3 117 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 C16orf90A8MZG2 172 aa3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 EIF5AP63241 154 aaKnown RBP3.91□□□□□ -1.78
HMGB1P20-201ENST00000402555 RPL19P84098 196 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms