RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 SMAD7O15105 426 aaKnown RBP5.9□□□□□ -1.47
HDAC9-201ENST00000401921 IGLC6P0CF74 106 aa5.9□□□□□ -1.47
HDAC9-201ENST00000401921 SMIM13P0DJ93 91 aa5.9□□□□□ -1.47
HDAC9-201ENST00000401921 ASIPP42127 132 aa5.9□□□□□ -1.47
HDAC9-201ENST00000401921 FAM74A4Q5TZK3 123 aa5.9□□□□□ -1.47
HDAC9-201ENST00000401921 C9orf139Q6ZV77 190 aa5.9□□□□□ -1.47
HDAC9-201ENST00000401921 C2orf91Q6ZV80 131 aa5.9□□□□□ -1.47
HDAC9-201ENST00000401921 TRAV21A0A0B4J279 112 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 RPL32P62910 135 aaKnown RBP5.89□□□□□ -1.47
HDAC9-201ENST00000401921 LGALS9BQ3B8N2 356 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 ZC2HC1BQ5TFG8 222 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 LGALS9CQ6DKI2 356 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 ERG28Q9UKR5 140 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 CLPSL1A2RUU4 121 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 FAM223BA6NKX1 122 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 TGFAP01135 160 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 ID1P41134 155 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 FAM223AQ8IWN6 122 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 YAE1D1Q9NRH1 226 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 C2CD3Q4AC94 2353 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 IGKCP01834 107 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 ZNF688P0C7X2 276 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 FAM159AQ6UWV7 190 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 DUX5Q96PT3 197 aa5.89□□□□□ -1.47
HDAC9-201ENST00000401921 SPANXB1Q9NS25 103 aaPredicted RBP5.89□□□□□ -1.47
HDAC9-201ENST00000401921 CELSR1Q9NYQ6 3014 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 GNRH2O43555 120 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 MSMBP08118 114 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 LAGE3Q14657 143 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 ANXA2RQ3ZCQ2 193 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 LINC01559Q495D7 138 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 FOXI2Q6ZQN5 318 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 Q6ZS46 218 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 SCGB3A1Q96QR1 104 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 A0A096LNJ9 63 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 TRAV8-2A0A0B4J237 113 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 TMEM8BA6NDV4 472 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 ATP5LO75964 103 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 DPM2O94777 84 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 SRSF1Q07955 248 aaKnown RBP eCLIP5.88□□□□□ -1.47
HDAC9-201ENST00000401921 LINC00477Q96M19 166 aa5.88□□□□□ -1.47
HDAC9-201ENST00000401921 F8W1H4 67 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 BRI3O95415 125 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 CD7P09564 240 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 SYT8Q8NBV8 401 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 RNF185Q96GF1 192 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 C20orf78Q9BR46 151 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 ANKRD17O75179 2603 aaKnown RBP5.87□□□□□ -1.47
HDAC9-201ENST00000401921 TRAV12-3A0A0B4J271 114 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 A0A1B0GWB2 263 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 RBAKDNA6NC62 111 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 OVOL1O14753 267 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 Q8N8P6 123 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 C20orf173Q96LM9 149 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 NDUFA4O00483 81 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 MRPL35Q9NZE8 188 aaKnown RBP5.87□□□□□ -1.47
HDAC9-201ENST00000401921 AGRNO00468 2067 aa5.87□□□□□ -1.47
HDAC9-201ENST00000401921 DOPEY1Q5JWR5 2465 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 ZNF462Q96JM2 2506 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 K7EMI3 77 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 MT-ATP8P03928 68 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 PSMG4Q5JS54 123 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 C10orf105Q8TEF2 133 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 AJUBAQ96IF1 538 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 USMG5Q96IX5 58 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 C1QTNF4Q9BXJ3 329 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 A0A087WWL8 130 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 B4DSR2 109 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 APOMO95445 188 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 INSL3P51460 131 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 PRR9Q5T870 116 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 SCGB1D4Q6XE38 83 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 C9orf47Q6ZRZ4 202 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 HIST1H4GQ99525 98 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 DAZ1Q9NQZ3 744 aaKnown RBP5.86□□□□□ -1.47
HDAC9-201ENST00000401921 NHP2Q9NX24 153 aaKnown RBP5.86□□□□□ -1.47
HDAC9-201ENST00000401921 U3KQK5 164 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 CRYBG3Q68DQ2 2970 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 FLNCQ14315 2725 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 H3BMG7 143 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 IGHV4-59P01825 116 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 EMP1P54849 157 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 OR9G4Q8NGQ1 327 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 RPL39LQ96EH5 51 aaKnown RBP5.86□□□□□ -1.47
HDAC9-201ENST00000401921 DPH3P1Q9H4G8 78 aa5.86□□□□□ -1.47
HDAC9-201ENST00000401921 TRAV12-2A0A075B6T6 113 aa5.85□□□□□ -1.47
HDAC9-201ENST00000401921 GAGE13Q4V321 117 aa5.85□□□□□ -1.47
HDAC9-201ENST00000401921 TEX29Q8N6K0 151 aa5.85□□□□□ -1.47
HDAC9-201ENST00000401921 ZNF256Q9Y2P7 627 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-201ENST00000401921 ABCA2Q9BZC7 2435 aa5.85□□□□□ -1.47
HDAC9-201ENST00000401921 SUMO2P61956 95 aaKnown RBP5.85□□□□□ -1.47
HDAC9-201ENST00000401921 ZFAND6Q6FIF0 208 aa5.85□□□□□ -1.47
HDAC9-201ENST00000401921 GATD1Q8NB37 220 aa5.85□□□□□ -1.47
HDAC9-201ENST00000401921 PRORYQ9H606 182 aa5.85□□□□□ -1.47
HDAC9-201ENST00000401921 K7ERJ3 54 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 EDN2P20800 178 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 SYNJ2BPP57105 145 aa5.84□□□□□ -1.47
HDAC9-201ENST00000401921 ZNF56Q15929 161 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms