RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 GAGE12JA6NER3 117 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 PGPEP1LA6NFU8 196 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 GGTLC3B5MD39 225 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 H0YIZ8 118 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 GNG5P63218 68 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 GAGE1Q13065 139 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 GAGE4Q13068 117 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 GAGE5Q13069 117 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 LRRC37A5PQ49AS3 106 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 GAGE13Q4V321 117 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 TOR2AQ5JU69 321 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 FAM74A1Q5RGS3 127 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 Q8N976 141 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 COX11Q9Y6N1 276 aa9.53□□□□□ -0.88
VAMP1-203ENST00000400911 PKHD1L1Q86WI1 4243 aa9.52□□□□□ -0.88
VAMP1-203ENST00000400911 RNF222A6NCQ9 220 aa9.52□□□□□ -0.89
VAMP1-203ENST00000400911 ZNF80P51504 273 aaPredicted RBP9.52□□□□□ -0.89
VAMP1-203ENST00000400911 H2BFSP57053 126 aa9.52□□□□□ -0.89
VAMP1-203ENST00000400911 ZNF506Q5JVG8 444 aa9.52□□□□□ -0.89
VAMP1-203ENST00000400911 C9orf85Q96MD7 179 aa9.52□□□□□ -0.89
VAMP1-203ENST00000400911 Q9UF83 564 aa9.52□□□□□ -0.89
VAMP1-203ENST00000400911 GIPP09681 153 aaPredicted RBP9.51□□□□□ -0.89
VAMP1-203ENST00000400911 ACOT6Q3I5F7 207 aaPredicted RBP9.51□□□□□ -0.89
VAMP1-203ENST00000400911 ARL6IP6Q8N6S5 226 aa9.51□□□□□ -0.89
VAMP1-203ENST00000400911 TMEM75Q8N9X5 138 aa9.51□□□□□ -0.89
VAMP1-203ENST00000400911 SH3BGRL3Q9H299 93 aa9.51□□□□□ -0.89
VAMP1-203ENST00000400911 IGKV2D-24A0A075B6R9 120 aa9.5□□□□□ -0.89
VAMP1-203ENST00000400911 TAAR5O14804 337 aa9.5□□□□□ -0.89
VAMP1-203ENST00000400911 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
VAMP1-203ENST00000400911 AKAP14Q86UN6 197 aa9.5□□□□□ -0.89
VAMP1-203ENST00000400911 OR2T35Q8NGX2 323 aa9.5□□□□□ -0.89
VAMP1-203ENST00000400911 PPP1R1CQ8WVI7 109 aa9.5□□□□□ -0.89
VAMP1-203ENST00000400911 PTH2Q96A98 100 aa9.5□□□□□ -0.89
VAMP1-203ENST00000400911 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 IGLV2-8P01709 118 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 RNASE3P12724 160 aaKnown RBP9.49□□□□□ -0.89
VAMP1-203ENST00000400911 CYB561D1Q8N8Q1 229 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 RMI2Q96E14 147 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 NDFIP1Q9BT67 221 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 SAMD10Q9BYL1 202 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 PARLQ9H300 379 aa9.49□□□□□ -0.89
VAMP1-203ENST00000400911 A0A087WWC5 75 aa9.48□□□□□ -0.89
VAMP1-203ENST00000400911 GCGP01275 180 aa9.48□□□□□ -0.89
VAMP1-203ENST00000400911 ZFP2Q6ZN57 461 aa9.48□□□□□ -0.89
VAMP1-203ENST00000400911 SMIM3Q9BZL3 60 aa9.48□□□□□ -0.89
VAMP1-203ENST00000400911 KLK12Q9UKR0 248 aa9.48□□□□□ -0.89
VAMP1-203ENST00000400911 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
VAMP1-203ENST00000400911 HMGB3O15347 200 aaKnown RBP9.47□□□□□ -0.89
VAMP1-203ENST00000400911 PFDN1O60925 122 aa9.47□□□□□ -0.89
VAMP1-203ENST00000400911 MPC2O95563 127 aa9.47□□□□□ -0.89
VAMP1-203ENST00000400911 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
VAMP1-203ENST00000400911 LGALSLQ3ZCW2 172 aaPredicted RBP9.47□□□□□ -0.89
VAMP1-203ENST00000400911 PQLC2Q6ZP29 291 aa9.47□□□□□ -0.89
VAMP1-203ENST00000400911 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
VAMP1-203ENST00000400911 UBE2WQ96B02 151 aa9.47□□□□□ -0.89
VAMP1-203ENST00000400911 A0A1W2PPV4 95 aa9.46□□□□□ -0.9
VAMP1-203ENST00000400911 A8MWV9 139 aa9.46□□□□□ -0.9
VAMP1-203ENST00000400911 HNRNPA3P51991 378 aaKnown RBP9.46□□□□□ -0.9
VAMP1-203ENST00000400911 FGF8P55075 233 aaPredicted RBP9.46□□□□□ -0.9
VAMP1-203ENST00000400911 NIT1Q86X76 327 aa9.46□□□□□ -0.9
VAMP1-203ENST00000400911 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
VAMP1-203ENST00000400911 DAZAP1Q96EP5 407 aaKnown RBP9.46□□□□□ -0.9
VAMP1-203ENST00000400911 LINC00479Q96M42 142 aa9.46□□□□□ -0.9
VAMP1-203ENST00000400911 JPT2Q9H910 190 aa9.46□□□□□ -0.9
VAMP1-203ENST00000400911 PSG8Q9UQ74 426 aa9.46□□□□□ -0.9
VAMP1-203ENST00000400911 HSPB11Q9Y547 144 aa9.46□□□□□ -0.9
VAMP1-203ENST00000400911 TCRAP04437 139 aa9.45□□□□□ -0.9
VAMP1-203ENST00000400911 RAB2AP61019 212 aa9.45□□□□□ -0.9
VAMP1-203ENST00000400911 SMUG1Q53HV7 270 aa9.45□□□□□ -0.9
VAMP1-203ENST00000400911 UFSP1Q6NVU6 142 aa9.45□□□□□ -0.9
VAMP1-203ENST00000400911 FXYD6-FXYD2A0A087WZ82 144 aa9.44□□□□□ -0.9
VAMP1-203ENST00000400911 SERTM2A0A1B0GWG4 89 aa9.44□□□□□ -0.9
VAMP1-203ENST00000400911 IGLV2-11P01706 119 aa9.44□□□□□ -0.9
VAMP1-203ENST00000400911 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
VAMP1-203ENST00000400911 S100A4P26447 101 aaKnown RBP9.44□□□□□ -0.9
VAMP1-203ENST00000400911 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
VAMP1-203ENST00000400911 WFDC1Q9HC57 220 aa9.44□□□□□ -0.9
VAMP1-203ENST00000400911 A0A087WX48 190 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 IGKV3D-20A0A0C4DH25 116 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 K7EQM0 130 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 RPL12P30050 165 aaKnown RBP9.43□□□□□ -0.9
VAMP1-203ENST00000400911 FLI1Q01543 452 aaPredicted RBP9.43□□□□□ -0.9
VAMP1-203ENST00000400911 ZFP69Q49AA0 526 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 TCTE3Q8IZS6 198 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 C5orf17Q8NAS9 161 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
VAMP1-203ENST00000400911 PIK3CD-AS1Q5SR53 167 aa9.42□□□□□ -0.9
VAMP1-203ENST00000400911 DMRTA1Q5VZB9 504 aa9.42□□□□□ -0.9
VAMP1-203ENST00000400911 ATRAIDQ6UW56 229 aa9.42□□□□□ -0.9
VAMP1-203ENST00000400911 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
VAMP1-203ENST00000400911 ASIPP42127 132 aa9.41□□□□□ -0.9
VAMP1-203ENST00000400911 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
VAMP1-203ENST00000400911 ELOBQ15370 118 aa9.41□□□□□ -0.9
VAMP1-203ENST00000400911 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
VAMP1-203ENST00000400911 OR2G3Q8NGZ4 309 aa9.41□□□□□ -0.9
VAMP1-203ENST00000400911 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms