RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
GABPA-202ENST00000400075 CT83Q5H943 113 aa11.08□□□□□ -0.64
GABPA-202ENST00000400075 NKAPP1Q8N9T2 125 aa11.08□□□□□ -0.64
GABPA-202ENST00000400075 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
GABPA-202ENST00000400075 Q6ZQT7 251 aa11.08□□□□□ -0.64
GABPA-202ENST00000400075 LYPD6Q86Y78 171 aa11.08□□□□□ -0.64
GABPA-202ENST00000400075 RNF183Q96D59 192 aa11.08□□□□□ -0.64
GABPA-202ENST00000400075 MYMXA0A1B0GTQ4 84 aa11.07□□□□□ -0.64
GABPA-202ENST00000400075 TP53TG1Q9Y2A0 90 aa11.07□□□□□ -0.64
GABPA-202ENST00000400075 NEGR1Q7Z3B1 354 aa11.07□□□□□ -0.64
GABPA-202ENST00000400075 COL5A1P20908 1838 aaPredicted RBP11.07□□□□□ -0.64
GABPA-202ENST00000400075 VWC2LB2RUY7 222 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 TRBV24-1A0A075B6N3 115 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 ZC2HC1AQ96GY0 325 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 TM2D2Q9BX73 214 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 PKIGQ9Y2B9 76 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 INS-IGF2F8WCM5 200 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 F8WEM9 126 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 FAM104BQ5XKR9 115 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 C2orf66Q6UXQ4 117 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 PSMG3-AS1Q96PY0 264 aa11.06□□□□□ -0.64
GABPA-202ENST00000400075 E7EUB6 86 aa11.05□□□□□ -0.64
GABPA-202ENST00000400075 LBHQ53QV2 105 aaPredicted RBP11.05□□□□□ -0.64
GABPA-202ENST00000400075 SCGB1A1P11684 91 aa11.05□□□□□ -0.64
GABPA-202ENST00000400075 MAP6D1Q9H9H5 199 aa11.05□□□□□ -0.64
GABPA-202ENST00000400075 EBI3Q14213 229 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 COL5A1-AS1Q5SY13 56 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 CYYR1Q96J86 154 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 GAGE10A6NGK3 116 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 IGHV3-30P01768 117 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 IGHV3-33P01772 117 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 IGHV3-30-5P0DP03 117 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 UBE2BP63146 152 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
GABPA-202ENST00000400075 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
GABPA-202ENST00000400075 PRSS29PA6NIE9 313 aa11.03□□□□□ -0.64
GABPA-202ENST00000400075 PLP1P60201 277 aa11.03□□□□□ -0.64
GABPA-202ENST00000400075 ZNF106Q9H2Y7 1883 aaKnown RBP11.03□□□□□ -0.64
GABPA-202ENST00000400075 ANKRD17O75179 2603 aaKnown RBP11.03□□□□□ -0.64
GABPA-202ENST00000400075 LRP4O75096 1905 aa11.02□□□□□ -0.64
GABPA-202ENST00000400075 A0A1W2PPR1 153 aa11.02□□□□□ -0.64
GABPA-202ENST00000400075 LGALS9O00182 355 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 AVPP01185 164 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 PFN2P35080 140 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 NPC2P61916 151 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 ZNF702PQ9H963 129 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 C10orf99Q6UWK7 81 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 Q6ZWC4 215 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 WI2-2373I1.2A0A1W2PRP0 233 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 C20orf144Q9BQM9 153 aa11.02□□□□□ -0.65
GABPA-202ENST00000400075 LINC00482Q8N8I6 264 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 XCL1P47992 114 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 CCDC140Q96MF4 163 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 A0A0J9YX75 114 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 ZNF48Q96MX3 618 aaPredicted RBP11.01□□□□□ -0.65
GABPA-202ENST00000400075 NDUFAF3Q9BU61 184 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 ATRAIDQ6UW56 229 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 FAM231DQ6ZW35 169 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 C5orf30Q96GV9 206 aa11.01□□□□□ -0.65
GABPA-202ENST00000400075 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
GABPA-202ENST00000400075 GATD1Q8NB37 220 aa11□□□□□ -0.65
GABPA-202ENST00000400075 NXPH4O95158 308 aa11□□□□□ -0.65
GABPA-202ENST00000400075 ZNF726P1Q15940 193 aa11□□□□□ -0.65
GABPA-202ENST00000400075 AMTNQ6UX39 209 aa11□□□□□ -0.65
GABPA-202ENST00000400075 CHAC1Q9BUX1 264 aa11□□□□□ -0.65
GABPA-202ENST00000400075 PRO0255Q9UI72 69 aa11□□□□□ -0.65
GABPA-202ENST00000400075 EGR2P11161 476 aaPredicted RBP11□□□□□ -0.65
GABPA-202ENST00000400075 PATE2Q6UY27 113 aa11□□□□□ -0.65
GABPA-202ENST00000400075 FAM110AQ9BQ89 295 aa11□□□□□ -0.65
GABPA-202ENST00000400075 CDK2AP2O75956 126 aa11□□□□□ -0.65
GABPA-202ENST00000400075 PRB2P02812 416 aaPredicted RBP11□□□□□ -0.65
GABPA-202ENST00000400075 DEFB1P60022 68 aa11□□□□□ -0.65
GABPA-202ENST00000400075 TMEM141Q96I45 108 aa11□□□□□ -0.65
GABPA-202ENST00000400075 NDUFA7O95182 113 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 TSPAN13O95857 204 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 Q8N1Y9 231 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 PAX2Q02962 417 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 TMEM263Q8WUH6 116 aaKnown RBP10.99□□□□□ -0.65
GABPA-202ENST00000400075 K7EQD1 137 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 LEPROTO15243 131 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 PROP1O75360 226 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 PMVKQ15126 192 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 Q8N8P6 123 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
GABPA-202ENST00000400075 DEFB131BA0A096LNP1 70 aa10.98□□□□□ -0.65
GABPA-202ENST00000400075 MRPL51Q4U2R6 128 aaKnown RBP10.98□□□□□ -0.65
GABPA-202ENST00000400075 MRPL36Q9P0J6 103 aaKnown RBP10.98□□□□□ -0.65
GABPA-202ENST00000400075 KIAA1549Q9HCM3 1950 aa10.98□□□□□ -0.65
GABPA-202ENST00000400075 ZC2HC1BQ5TFG8 222 aa10.98□□□□□ -0.65
GABPA-202ENST00000400075 LY6LH3BQJ8 138 aa10.98□□□□□ -0.65
GABPA-202ENST00000400075 UTF1Q5T230 341 aa10.98□□□□□ -0.65
GABPA-202ENST00000400075 C11orf52Q96A22 123 aa10.98□□□□□ -0.65
GABPA-202ENST00000400075 C15orf53Q8NAA6 179 aa10.98□□□□□ -0.65
GABPA-202ENST00000400075 SMIM9A6NGZ8 99 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms