RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 Q6ZRN7 208 aaPredicted RBP9.13□□□□□ -0.95
VCX3A-202ENST00000398729 Q86TA4 180 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 NFE4Q86UQ8 179 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 WFDC10BQ8IUB3 73 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 PTH2Q96A98 100 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 PRADC1Q9BSG0 188 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 SCRT2Q9NQ03 307 aa9.13□□□□□ -0.95
VCX3A-202ENST00000398729 TRBV6-4A0A1B0GX49 114 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 PGPEP1LA6NFU8 196 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 DNAH10OSP0CZ25 163 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 RHOHQ15669 191 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 ZNF506Q5JVG8 444 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 DPPA3Q6W0C5 159 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 KCNRGQ8N5I3 272 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 VPS13BQ7Z7G8 4022 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
VCX3A-202ENST00000398729 IGHV3-73A0A0B4J1V6 119 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 ASIPP42127 132 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 TIRAPP58753 221 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 UBE2G1P62253 170 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 CST9LP1Q5W188 147 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 FMC1Q96HJ9 113 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 TCEAL7Q9BRU2 100 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 ZFP30Q9Y2G7 519 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 TNFRSF18Q9Y5U5 241 aa9.11□□□□□ -0.95
VCX3A-202ENST00000398729 HMSDA8MTL9 139 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 A8MWV9 139 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 B4DEV8 164 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 EREGO14944 169 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 SEC11BP0C7V7 166 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 MGST1P10620 155 aaKnown RBP9.1□□□□□ -0.95
VCX3A-202ENST00000398729 FHITP49789 147 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 KRTAP10-2P60368 255 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 ERVFC1-1P60608 527 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 PIK3CD-AS1Q5SR53 167 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 C10orf126Q8N4M7 172 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 MSRB1Q9NZV6 116 aa9.1□□□□□ -0.95
VCX3A-202ENST00000398729 A0A0D9SG52 128 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 KANTRA0A1W2PQU2 76 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 UMAD1C9J7I0 102 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 LGALSLQ3ZCW2 172 aaPredicted RBP9.09□□□□□ -0.95
VCX3A-202ENST00000398729 COX8CQ7Z4L0 72 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 OR11H4Q8NGC9 324 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 SFT2D1Q8WV19 159 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 ZC2HC1AQ96GY0 325 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 ZNF471Q9BX82 626 aaPredicted RBP9.09□□□□□ -0.95
VCX3A-202ENST00000398729 IL36BQ9NZH7 164 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 BOLA1Q9Y3E2 137 aa9.09□□□□□ -0.95
VCX3A-202ENST00000398729 TRAV8-6A0A0B4J262 113 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 IGHV3-38A0A0C4DH36 116 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 TRBV6-1A0A0K0K1D8 114 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 M0R036 132 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 BCL2L11O43521 198 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 CRYGDP07320 174 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 AKR1C3P42330 323 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 CRIP1P50238 77 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 FAM162BQ5T6X4 162 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 ZFP2Q6ZN57 461 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 FAM213BQ8TBF2 198 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 PARLQ9H300 379 aa9.08□□□□□ -0.96
VCX3A-202ENST00000398729 KRBOX1C9JBD0 128 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 H3BVH4 76 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 PAGE4O60829 102 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 SH2D1AO60880 128 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 LTAP01374 205 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 EIF5AP63241 154 aaKnown RBP9.07□□□□□ -0.96
VCX3A-202ENST00000398729 OR10J3Q5JRS4 329 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 MBD3L1Q8WWY6 194 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
VCX3A-202ENST00000398729 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
VCX3A-202ENST00000398729 ZNF674Q2M3X9 581 aa9.06□□□□□ -0.96
VCX3A-202ENST00000398729 LINC01556Q5JQF7 62 aa9.06□□□□□ -0.96
VCX3A-202ENST00000398729 LELP1Q5T871 98 aa9.06□□□□□ -0.96
VCX3A-202ENST00000398729 ATP6V0E2Q8NHE4 81 aa9.06□□□□□ -0.96
VCX3A-202ENST00000398729 GTSF1LQ9H1H1 148 aa9.06□□□□□ -0.96
VCX3A-202ENST00000398729 FLG2Q5D862 2391 aaPredicted RBP9.05□□□□□ -0.96
VCX3A-202ENST00000398729 A0A1B0GV50 99 aa9.05□□□□□ -0.96
VCX3A-202ENST00000398729 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
VCX3A-202ENST00000398729 RHODO00212 210 aa9.05□□□□□ -0.96
VCX3A-202ENST00000398729 PFDN1O60925 122 aa9.05□□□□□ -0.96
VCX3A-202ENST00000398729 S100A9P06702 114 aaKnown RBP9.05□□□□□ -0.96
VCX3A-202ENST00000398729 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
VCX3A-202ENST00000398729 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
VCX3A-202ENST00000398729 PHLDA3Q9Y5J5 127 aa9.05□□□□□ -0.96
VCX3A-202ENST00000398729 A0A087WTM6 91 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 GAGE12JA6NER3 117 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 TPT1P13693 172 aaKnown RBP9.04□□□□□ -0.96
VCX3A-202ENST00000398729 GAGE1Q13065 139 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 GAGE4Q13068 117 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 GAGE5Q13069 117 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 Q6ZSN1 163 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 SAMD10Q9BYL1 202 aa9.04□□□□□ -0.96
VCX3A-202ENST00000398729 JPT2Q9H910 190 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms