RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 hADV29S1A0JD25 119 aa5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 TFF1P04155 84 aa5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 TMEM30BQ3MIR4 351 aa5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 NEXN-AS1Q8NBZ9 246 aa5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 PAXXQ9BUH6 204 aa5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 IGHV3-13P01766 116 aa5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 ZNF71Q9NQZ8 489 aaPredicted RBP5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 TMEM14BQ9NUH8 114 aa5.1□□□□□ -1.59
TM9SF4-202ENST00000398022 IGLL5B9A064 214 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 WISP2O76076 250 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 DAD1P61803 113 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 ERHP84090 104 aaKnown RBP5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 PVRIGQ6DKI7 326 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 METTL26Q96S19 204 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 APCP25054 2843 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 LEPROTL1O95214 131 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 UBE2L3P68036 154 aaKnown RBP5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 TP73-AS1Q9UF72 201 aa5.09□□□□□ -1.59
TM9SF4-202ENST00000398022 IGKV1D-17A0A075B6S4 117 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 ATOX1O00244 68 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 SAA2P0DJI9 122 aaPredicted RBP5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 CXCL5P42830 114 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 PRCDQ00LT1 54 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 ERCC8Q13216 396 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 FXYD3Q14802 87 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 PAPPA-AS1Q5QFB9 102 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 SPACA3Q8IXA5 215 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 POM121L12Q8N7R1 296 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 MYOZ3Q8TDC0 251 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 DPH3P1Q9H4G8 78 aa5.09□□□□□ -1.6
TM9SF4-202ENST00000398022 IGHV3OR15-7A0A075B7D8 119 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 hDV102S1A0JD36 115 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 PROP1O75360 226 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 ZNRF1Q8ND25 227 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 TM2D3Q9BRN9 247 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 ABCA12Q86UK0 2595 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 K7EM74 188 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 COX7A2P2O60397 106 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 C2orf83Q53S99 150 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 PRR14LQ5THK1 2151 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 DOPEY2Q9Y3R5 2298 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 TNCP24821 2201 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 ANK3Q12955 4377 aaKnown RBP5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 UPK2O00526 184 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 TSKUQ8WUA8 353 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 PHLDA1Q8WV24 401 aaPredicted RBP5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 ITPR2Q14571 2701 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 HECTD1Q9ULT8 2610 aa5.08□□□□□ -1.6
TM9SF4-202ENST00000398022 TRAV17A0A0B4J275 112 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 LINC01619G3V211 115 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 PRYO14603 147 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 IGLV1-44P01699 117 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 SCGB1C2P0DMR2 95 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 MFAP2P55001 183 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 HOXA4Q00056 320 aaPredicted RBP5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 LINC01545Q5VT33 79 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 CADP27708 2225 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 ICE1Q9Y2F5 2266 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 IGHV1-58A0A0C4DH39 117 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 WI2-2373I1.2A0A1W2PRP0 233 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 SMIM27A0A1W2PRY6 76 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 SMCPP49901 116 aaPredicted RBP5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 SNRPD3P62318 126 aaKnown RBP5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 UNQ9165/PRO28630Q6UXU0 137 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 LEAP2Q969E1 77 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 INTS1Q8N201 2190 aaKnown RBP5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 SVEP1Q4LDE5 3571 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 IGHV1-18A0A0C4DH31 117 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 C2orf70A6NJV1 201 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 F2Z2F3 143 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 FCER1GP30273 86 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 LINC00527Q9UJ94 153 aa5.07□□□□□ -1.6
TM9SF4-202ENST00000398022 LGALS9O00182 355 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 DEFB109BQ30KR1 87 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 FAM222AQ5U5X8 452 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 C10orf113Q5VZT2 155 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 EBLN2Q6P2I7 272 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 SBSPONQ8IVN8 264 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 C9orf106Q8NAJ2 232 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 C17orf77Q96MU5 243 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 TET2Q6N021 2002 aaPredicted RBP5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 TRGV11A0A075B6L2 103 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 ORMDL2Q53FV1 153 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 ITLN1Q8WWA0 313 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 ODF3Q96PU9 254 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 PGPA6NDG6 321 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 LGALS9CQ6DKI2 356 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 DCANP1Q8TF63 244 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 ZNF714Q96N38 554 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 PEX7O00628 323 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 CACNG7P62955 275 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 C17orf58Q2M2W7 97 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 ATP1A1-AS1Q5TC04 95 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 DEFB108BQ8NET1 73 aa5.06□□□□□ -1.6
TM9SF4-202ENST00000398022 TLN1Q9Y490 2541 aaKnown RBP5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 HRNRQ86YZ3 2850 aaPredicted RBP5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 NAV3Q8IVL0 2385 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 PLCE1Q9P212 2302 aa5.05□□□□□ -1.6
TM9SF4-202ENST00000398022 PDPNQ86YL7 162 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms