RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SVBPQ8N300 66 aa13.89□□□□□ -0.19
MAP1LC3A-203ENST00000397709 LINC00612Q8N6U2 182 aa13.89□□□□□ -0.19
MAP1LC3A-203ENST00000397709 FER1L6-AS1Q8NA97 138 aa13.89□□□□□ -0.19
MAP1LC3A-203ENST00000397709 GFRA4Q9GZZ7 299 aa13.89□□□□□ -0.19
MAP1LC3A-203ENST00000397709 EDA2RQ9HAV5 297 aa13.89□□□□□ -0.19
MAP1LC3A-203ENST00000397709 MUC4Q99102 2169 aa13.88□□□□□ -0.19
MAP1LC3A-203ENST00000397709 TEX48A0A1B0GUV7 120 aa13.88□□□□□ -0.19
MAP1LC3A-203ENST00000397709 A0A1W2PPQ1 181 aa13.88□□□□□ -0.19
MAP1LC3A-203ENST00000397709 M0R2P5 195 aa13.88□□□□□ -0.19
MAP1LC3A-203ENST00000397709 SPART-AS1P0CW21 52 aa13.88□□□□□ -0.19
MAP1LC3A-203ENST00000397709 LGALS9BQ3B8N2 356 aa13.88□□□□□ -0.19
MAP1LC3A-203ENST00000397709 PTH2Q96A98 100 aa13.88□□□□□ -0.19
MAP1LC3A-203ENST00000397709 FAM231BA6NCW3 169 aa13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 CTRLP40313 264 aa13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 FOXA3P55318 350 aaPredicted RBP13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 RHEBQ15382 184 aa13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 Q6ZTI0 123 aa13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 MRPL16Q9NX20 251 aaKnown RBP13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 PHLDA3Q9Y5J5 127 aa13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 STAB2Q8WWQ8 2551 aa13.87□□□□□ -0.19
MAP1LC3A-203ENST00000397709 TRGV1A0A0A0MS02 117 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 SMIM27A0A1W2PRY6 76 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 C7orf77A4D0Y5 90 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 CXorf65A6NEN9 183 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 LYZL1Q6UWQ5 148 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 RASL10AQ92737 203 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 CTDSP1Q9GZU7 261 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 DNAH7Q8WXX0 4024 aa13.86□□□□□ -0.19
MAP1LC3A-203ENST00000397709 F2Z2F3 143 aa13.85□□□□□ -0.19
MAP1LC3A-203ENST00000397709 NXPH4O95158 308 aa13.85□□□□□ -0.19
MAP1LC3A-203ENST00000397709 SNAPINO95295 136 aa13.85□□□□□ -0.19
MAP1LC3A-203ENST00000397709 PIK3CD-AS1Q5SR53 167 aa13.85□□□□□ -0.19
MAP1LC3A-203ENST00000397709 OR10AG1Q8NH19 301 aa13.85□□□□□ -0.19
MAP1LC3A-203ENST00000397709 TPPP3Q9BW30 176 aa13.85□□□□□ -0.19
MAP1LC3A-203ENST00000397709 A0A087WWC5 75 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 GAGE12BA1L429 117 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 HIGD1CA8MV81 97 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 GAGE7O76087 117 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 GAGE12FP0CL80 117 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 GAGE12GP0CL81 117 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 GAGE12IP0CL82 117 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 C12orf74Q32Q52 190 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 ZNF876PQ49A33 203 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 ZFP82Q8N141 532 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 C11orf45Q8TAV5 145 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 NDUFAF3Q9BU61 184 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 CNFNQ9BYD5 112 aa13.84□□□□□ -0.19
MAP1LC3A-203ENST00000397709 MUC21A0A0G2JKD1 596 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 MUC21A0A140T8X8 626 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 DEFB130BP0DP73 79 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 DEFB130AP0DP74 79 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 CACNG7P62955 275 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 DMRTA1Q5VZB9 504 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 WDR73Q6P4I2 378 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 SYT8Q8NBV8 401 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 NUP35Q8NFH5 326 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 PGLYRP4Q96LB8 373 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 C18orf15Q96N68 181 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 NAT8BQ9UHF3 227 aa13.83□□□□□ -0.2
MAP1LC3A-203ENST00000397709 IGHV4-4A0A075B6R2 117 aa13.82□□□□□ -0.2
MAP1LC3A-203ENST00000397709 M0R381 172 aa13.82□□□□□ -0.2
MAP1LC3A-203ENST00000397709 DAD1P61803 113 aa13.82□□□□□ -0.2
MAP1LC3A-203ENST00000397709 RPS10P5Q9NQ39 176 aa13.82□□□□□ -0.2
MAP1LC3A-203ENST00000397709 TMEM242Q9NWH2 141 aa13.82□□□□□ -0.2
MAP1LC3A-203ENST00000397709 NANOS2P60321 138 aaKnown RBP13.81□□□□□ -0.2
MAP1LC3A-203ENST00000397709 SPANXN1Q5VSR9 72 aa13.81□□□□□ -0.2
MAP1LC3A-203ENST00000397709 ATRAIDQ6UW56 229 aa13.8□□□□□ -0.2
MAP1LC3A-203ENST00000397709 IMMP2LQ96T52 175 aa13.8□□□□□ -0.2
MAP1LC3A-203ENST00000397709 TGP01266 2768 aa13.8□□□□□ -0.2
MAP1LC3A-203ENST00000397709 TRGV2A0A075B6R0 118 aa13.79□□□□□ -0.2
MAP1LC3A-203ENST00000397709 RS1O15537 224 aa13.79□□□□□ -0.2
MAP1LC3A-203ENST00000397709 POM121L12Q8N7R1 296 aa13.79□□□□□ -0.2
MAP1LC3A-203ENST00000397709 TRAV4A0A0B4J268 109 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 A0A1B0GUT8 65 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 A8MWV9 139 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 NTF3P20783 257 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 SSTP61278 116 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 Q6ZTC4 211 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 BORCS7Q96B45 105 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 JPT2Q9H910 190 aa13.78□□□□□ -0.2
MAP1LC3A-203ENST00000397709 FAM3BP58499 235 aaPredicted RBP13.77□□□□□ -0.21
MAP1LC3A-203ENST00000397709 CFAP126Q5VTH2 177 aa13.77□□□□□ -0.21
MAP1LC3A-203ENST00000397709 MSRB1Q9NZV6 116 aa13.77□□□□□ -0.21
MAP1LC3A-203ENST00000397709 NACAE9PAV3 2078 aa13.76□□□□□ -0.21
MAP1LC3A-203ENST00000397709 ATP6V1G1O75348 118 aa13.76□□□□□ -0.21
MAP1LC3A-203ENST00000397709 TWIST1Q15672 202 aa13.76□□□□□ -0.21
MAP1LC3A-203ENST00000397709 OR4C5Q8NGB2 326 aa13.76□□□□□ -0.21
MAP1LC3A-203ENST00000397709 ATP5G1P05496 136 aa13.75□□□□□ -0.21
MAP1LC3A-203ENST00000397709 RIGQ13278 110 aa13.75□□□□□ -0.21
MAP1LC3A-203ENST00000397709 KCNIP4Q6PIL6 250 aa13.75□□□□□ -0.21
MAP1LC3A-203ENST00000397709 ZNF479Q96JC4 524 aa13.75□□□□□ -0.21
MAP1LC3A-203ENST00000397709 AP1S3Q96PC3 154 aa13.75□□□□□ -0.21
MAP1LC3A-203ENST00000397709 SAMD10Q9BYL1 202 aa13.75□□□□□ -0.21
MAP1LC3A-203ENST00000397709 DYNC2H1Q8NCM8 4307 aaKnown RBP13.74□□□□□ -0.21
MAP1LC3A-203ENST00000397709 IGHV3-53P01767 116 aa13.74□□□□□ -0.21
MAP1LC3A-203ENST00000397709 CRYGDP07320 174 aa13.74□□□□□ -0.21
MAP1LC3A-203ENST00000397709 TRGC1P0CF51 173 aa13.74□□□□□ -0.21
MAP1LC3A-203ENST00000397709 UFSP1Q6NVU6 142 aa13.74□□□□□ -0.21
MAP1LC3A-203ENST00000397709 CIDEAO60543 219 aa13.73□□□□□ -0.21
MAP1LC3A-203ENST00000397709 ZFP2Q6ZN57 461 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms