RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 Q9HAA7 133 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 NUDT15Q9NV35 164 aa5.82□□□□□ -1.48
CAPN3-208ENST00000397204 FBLL1A6NHQ2 334 aaKnown RBP5.81□□□□□ -1.48
CAPN3-208ENST00000397204 TAS2R45P59539 299 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 ZNF876PQ49A33 203 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 FAM74A1Q5RGS3 127 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 SERTAD4-AS1Q5TG53 156 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 Q6ZSA8 131 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 GTSF1LQ9H1H1 148 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 OTORQ9NRC9 128 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 NAGKQ9UJ70 344 aa5.81□□□□□ -1.48
CAPN3-208ENST00000397204 UBR4Q5T4S7 5183 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 TRAV8-3A0A0A6YYJ7 113 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 PGPA6NDG6 321 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 RS1O15537 224 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 IGHV3-30P01768 117 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 IGHV3-33P01772 117 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 IGHV3-30-3P0DP02 117 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 IGHV3-30-5P0DP03 117 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 UBE2L3P68036 154 aaKnown RBP5.8□□□□□ -1.48
CAPN3-208ENST00000397204 CYCSP99999 105 aaKnown RBP5.8□□□□□ -1.48
CAPN3-208ENST00000397204 COTL1Q14019 142 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 RHOHQ15669 191 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 ATP6V0E2Q8NHE4 81 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 CMTM2Q8TAZ6 248 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 ASB13Q8WXK3 278 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 PTH2Q96A98 100 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 HYLS1Q96M11 299 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 NMES1Q9C002 83 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 SDF2L1Q9HCN8 221 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 TREM1Q9NP99 234 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 COX11Q9Y6N1 276 aa5.8□□□□□ -1.48
CAPN3-208ENST00000397204 FAM240BA0A1B0GVZ2 78 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 TYMSP04818 313 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 KHDC3LQ587J8 217 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 TOR2AQ5JU69 321 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 FFAR4Q5NUL3 377 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 CFAP126Q5VTH2 177 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 TVP23CQ96ET8 276 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 CBY1Q9Y3M2 126 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
CAPN3-208ENST00000397204 H0YIZ8 118 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 TAAR5O14804 337 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 MGST1P10620 155 aaKnown RBP5.78□□□□□ -1.48
CAPN3-208ENST00000397204 ASAH1Q13510 395 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 PQLC2Q6ZP29 291 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 GOLT1AQ6ZVE7 132 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 SCGB1C1Q8TD33 95 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 CCDC32Q9BV29 185 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 OR5AC2Q9NZP5 309 aa5.78□□□□□ -1.48
CAPN3-208ENST00000397204 A0A087WWC5 75 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 SERTM2A0A1B0GWG4 89 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 SIX6O95475 246 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 OXTP01178 125 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 S100A1P23297 94 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 WFDC2Q14508 124 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 DPPA3Q6W0C5 159 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 ZFP2Q6ZN57 461 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 Q8N976 141 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 NDFIP1Q9BT67 221 aa5.77□□□□□ -1.49
CAPN3-208ENST00000397204 TRAV8-1A0A0A6YYK1 113 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 IGHV3-73A0A0B4J1V6 119 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 A0A1W2PPV4 95 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 RNF222A6NCQ9 220 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 GGTLC3B5MD39 225 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 F6UZH7 168 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 ACOT6Q3I5F7 207 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-208ENST00000397204 LRRC37A5PQ49AS3 106 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 PIK3CD-AS1Q5SR53 167 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 DAZ4Q86SG3 579 aaKnown RBP5.76□□□□□ -1.49
CAPN3-208ENST00000397204 RMI2Q96E14 147 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 C9orf85Q96MD7 179 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 CHAC1Q9BUX1 264 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 DAZ3Q9NR90 486 aaKnown RBP5.76□□□□□ -1.49
CAPN3-208ENST00000397204 C11orf21Q9P2W6 132 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 RPH3ALQ9UNE2 315 aa5.76□□□□□ -1.49
CAPN3-208ENST00000397204 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-208ENST00000397204 RBFOX3A6NFN3 312 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 HSBP1L1C9JCN9 74 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 K7EQM0 130 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 LECT2O14960 151 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 SEC11BP0C7V7 166 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 FGF8P55075 233 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-208ENST00000397204 ZNF506Q5JVG8 444 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 SCXQ7RTU7 201 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 ENKURQ8TC29 256 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 PPP1R1CQ8WVI7 109 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 BAALCQ8WXS3 180 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 BATF3Q9NR55 127 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 NDUFA13Q9P0J0 144 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 HSPB11Q9Y547 144 aa5.75□□□□□ -1.49
CAPN3-208ENST00000397204 A8MWV9 139 aa5.74□□□□□ -1.49
CAPN3-208ENST00000397204 GCGP01275 180 aa5.74□□□□□ -1.49
CAPN3-208ENST00000397204 RNASE3P12724 160 aaKnown RBP5.74□□□□□ -1.49
CAPN3-208ENST00000397204 RPL12P30050 165 aaKnown RBP5.74□□□□□ -1.49
CAPN3-208ENST00000397204 ZNF80P51504 273 aaPredicted RBP5.74□□□□□ -1.49
CAPN3-208ENST00000397204 KRTAP10-4P60372 401 aaPredicted RBP5.74□□□□□ -1.49
CAPN3-208ENST00000397204 GAGE13Q4V321 117 aa5.74□□□□□ -1.49
CAPN3-208ENST00000397204 LINC00299Q6ZSB3 139 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms