RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PRNTQ86SH4 94 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 FRZBQ92765 325 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 ODF3Q96PU9 254 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 LINC01587Q99440 93 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 TRAPPC1Q9Y5R8 145 aa10.41□□□□□ -0.74
SEC13-208ENST00000397109 CT45A10P0DMU9 189 aa10.4□□□□□ -0.74
SEC13-208ENST00000397109 C9orf47Q6ZRZ4 202 aa10.4□□□□□ -0.74
SEC13-208ENST00000397109 NHLRC2Q8NBF2 726 aa10.4□□□□□ -0.74
SEC13-208ENST00000397109 RPP21Q9H633 154 aaKnown RBP10.4□□□□□ -0.74
SEC13-208ENST00000397109 APLNQ9ULZ1 77 aa10.4□□□□□ -0.74
SEC13-208ENST00000397109 IGHV4-4A0A075B6R2 117 aa10.39□□□□□ -0.75
SEC13-208ENST00000397109 S100A8P05109 93 aa10.39□□□□□ -0.75
SEC13-208ENST00000397109 PRB4P10163 310 aaPredicted RBP10.39□□□□□ -0.75
SEC13-208ENST00000397109 LEPP41159 167 aa10.39□□□□□ -0.75
SEC13-208ENST00000397109 COA6Q5JTJ3 125 aaKnown RBP10.39□□□□□ -0.75
SEC13-208ENST00000397109 NDFIP1Q9BT67 221 aa10.39□□□□□ -0.75
SEC13-208ENST00000397109 TRAV8-1A0A0A6YYK1 113 aa10.38□□□□□ -0.75
SEC13-208ENST00000397109 FABP9Q0Z7S8 132 aa10.38□□□□□ -0.75
SEC13-208ENST00000397109 PRR27Q6MZM9 219 aa10.38□□□□□ -0.75
SEC13-208ENST00000397109 LINC00477Q96M19 166 aa10.38□□□□□ -0.75
SEC13-208ENST00000397109 LENEPQ9Y5L5 61 aa10.38□□□□□ -0.75
SEC13-208ENST00000397109 HYDINQ4G0P3 5121 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 IGKV2-40A0A087WW87 121 aaPredicted RBP10.37□□□□□ -0.75
SEC13-208ENST00000397109 TRBV7-9A0A0J9YWB2 115 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 XKRY2A2RUG3 117 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 LYRM9A8MSI8 78 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 IGKV2D-40P01614 121 aaPredicted RBP10.37□□□□□ -0.75
SEC13-208ENST00000397109 HLA-DQA1P01909 254 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 DAD1P61803 113 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 Q6AWC8 147 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 SGK494Q96LW2 274 aa10.37□□□□□ -0.75
SEC13-208ENST00000397109 NDUFA6P56556 154 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 C16orf74Q96GX8 76 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 FAM19A4Q96LR4 140 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 VGLL1Q99990 258 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 NDUFAF3Q9BU61 184 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 AZU1P20160 251 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 RPS20P60866 119 aaKnown RBP10.36□□□□□ -0.75
SEC13-208ENST00000397109 TMEM78Q5T7P6 136 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
SEC13-208ENST00000397109 A0A1B0GW15 77 aa10.35□□□□□ -0.75
SEC13-208ENST00000397109 HIGD1CA8MV81 97 aa10.35□□□□□ -0.75
SEC13-208ENST00000397109 PRM2P04554 102 aa10.35□□□□□ -0.75
SEC13-208ENST00000397109 HTN1P15515 57 aa10.35□□□□□ -0.75
SEC13-208ENST00000397109 ZNF138P52744 262 aa10.35□□□□□ -0.75
SEC13-208ENST00000397109 SMUG1Q53HV7 270 aa10.35□□□□□ -0.75
SEC13-208ENST00000397109 FAM162BQ5T6X4 162 aa10.35□□□□□ -0.75
SEC13-208ENST00000397109 TMEM263Q8WUH6 116 aaKnown RBP10.35□□□□□ -0.75
SEC13-208ENST00000397109 TIMM8BQ9Y5J9 83 aaPredicted RBP10.35□□□□□ -0.75
SEC13-208ENST00000397109 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
SEC13-208ENST00000397109 CRISP2P16562 243 aa10.34□□□□□ -0.75
SEC13-208ENST00000397109 ERCC8Q13216 396 aa10.34□□□□□ -0.75
SEC13-208ENST00000397109 KIR3DS1Q14943 382 aa10.34□□□□□ -0.75
SEC13-208ENST00000397109 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
SEC13-208ENST00000397109 PLAC8L1A1L4L8 177 aa10.33□□□□□ -0.76
SEC13-208ENST00000397109 FABP5P3A8MUU1 101 aa10.33□□□□□ -0.76
SEC13-208ENST00000397109 J3KRW8 73 aa10.33□□□□□ -0.76
SEC13-208ENST00000397109 HTN3P15516 51 aa10.33□□□□□ -0.76
SEC13-208ENST00000397109 TMEM136Q6ZRR5 245 aa10.33□□□□□ -0.76
SEC13-208ENST00000397109 OR2D3Q8NGH3 330 aa10.33□□□□□ -0.76
SEC13-208ENST00000397109 RNASE8Q8TDE3 154 aaKnown RBP10.33□□□□□ -0.76
SEC13-208ENST00000397109 KMT2AQ03164 3969 aa10.33□□□□□ -0.76
SEC13-208ENST00000397109 TRAV12-3A0A0B4J271 114 aa10.32□□□□□ -0.76
SEC13-208ENST00000397109 A0A1B0GXF2 115 aa10.32□□□□□ -0.76
SEC13-208ENST00000397109 C7orf71A4D174 169 aa10.32□□□□□ -0.76
SEC13-208ENST00000397109 KLLNB2CW77 178 aa10.32□□□□□ -0.76
SEC13-208ENST00000397109 CRIP1P50238 77 aa10.32□□□□□ -0.76
SEC13-208ENST00000397109 ZFAND2AQ8N6M9 145 aa10.32□□□□□ -0.76
SEC13-208ENST00000397109 P0DMU3 169 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 TCL1AP56279 114 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 HBBP68871 147 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 Q0VG73 95 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 Q8TAT8 98 aa10.31□□□□□ -0.76
SEC13-208ENST00000397109 CBY3A6NI87 242 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 GPX1P07203 203 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 S100A2P29034 98 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 AKR1D1P51857 326 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 RIGQ13278 110 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 OR10J3Q5JRS4 329 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 GTSF1Q8WW33 167 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 C8orf49Q96NF6 230 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 NOP10Q9NPE3 64 aaKnown RBP10.3□□□□□ -0.76
SEC13-208ENST00000397109 VPS13DQ5THJ4 4388 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 MRPL54Q6P161 138 aaKnown RBP10.3□□□□□ -0.76
SEC13-208ENST00000397109 LINC00518Q8N0U6 118 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 BORCS7Q96B45 105 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
SEC13-208ENST00000397109 SH2D1AO60880 128 aa10.29□□□□□ -0.76
SEC13-208ENST00000397109 ZNF324O75467 553 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms