RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TRAV34A0A0B4J273 112 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 A8MWV9 139 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 GYPEP15421 78 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 GATA1P15976 413 aaPredicted RBP9.59□□□□□ -0.87
SEC13-204ENST00000397099 TIRAPP58753 221 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 DNLZQ5SXM8 178 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 FAM162BQ5T6X4 162 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 TMUB2Q71RG4 321 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 TCTE3Q8IZS6 198 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 PRADC1Q9BSG0 188 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 C11orf21Q9P2W6 132 aa9.59□□□□□ -0.87
SEC13-204ENST00000397099 TRBV6-4A0A1B0GX49 114 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 B4DEV8 164 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 RS1O15537 224 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 NXPH4O95158 308 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 LTAP01374 205 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 MGST1P10620 155 aaKnown RBP9.58□□□□□ -0.88
SEC13-204ENST00000397099 AKR1C3P42330 323 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 RHOHQ15669 191 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 CFAP126Q5VTH2 177 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 ZFP2Q6ZN57 461 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 IL36BQ9NZH7 164 aa9.58□□□□□ -0.88
SEC13-204ENST00000397099 PAGE4O60829 102 aa9.57□□□□□ -0.88
SEC13-204ENST00000397099 RNASE3P12724 160 aaKnown RBP9.57□□□□□ -0.88
SEC13-204ENST00000397099 NFE4Q86UQ8 179 aa9.57□□□□□ -0.88
SEC13-204ENST00000397099 ZNF575Q86XF7 245 aa9.57□□□□□ -0.88
SEC13-204ENST00000397099 SYT8Q8NBV8 401 aa9.57□□□□□ -0.88
SEC13-204ENST00000397099 MANBALQ9NQG1 85 aa9.57□□□□□ -0.88
SEC13-204ENST00000397099 DNAH11Q96DT5 4516 aa9.56□□□□□ -0.88
SEC13-204ENST00000397099 TRAV1-1A0A0B4J248 108 aa9.56□□□□□ -0.88
SEC13-204ENST00000397099 IGKV3D-20A0A0C4DH25 116 aa9.56□□□□□ -0.88
SEC13-204ENST00000397099 ZNF674Q2M3X9 581 aa9.56□□□□□ -0.88
SEC13-204ENST00000397099 ZNF506Q5JVG8 444 aa9.56□□□□□ -0.88
SEC13-204ENST00000397099 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
SEC13-204ENST00000397099 LY96Q9Y6Y9 160 aa9.56□□□□□ -0.88
SEC13-204ENST00000397099 KRBOX1C9JBD0 128 aa9.55□□□□□ -0.88
SEC13-204ENST00000397099 RHODO00212 210 aa9.55□□□□□ -0.88
SEC13-204ENST00000397099 EVI2AP22794 236 aa9.55□□□□□ -0.88
SEC13-204ENST00000397099 TNP2Q05952 138 aa9.55□□□□□ -0.88
SEC13-204ENST00000397099 C10orf126Q8N4M7 172 aa9.55□□□□□ -0.88
SEC13-204ENST00000397099 SLC25A29Q8N8R3 303 aa9.55□□□□□ -0.88
SEC13-204ENST00000397099 NHLRC2Q8NBF2 726 aa9.55□□□□□ -0.88
SEC13-204ENST00000397099 DYNC1H1Q14204 4646 aaKnown RBP9.54□□□□□ -0.88
SEC13-204ENST00000397099 PGPEP1LA6NFU8 196 aa9.54□□□□□ -0.88
SEC13-204ENST00000397099 SH2D1AO60880 128 aa9.54□□□□□ -0.88
SEC13-204ENST00000397099 C1QBP02746 253 aa9.54□□□□□ -0.88
SEC13-204ENST00000397099 LINC01559Q495D7 138 aa9.54□□□□□ -0.88
SEC13-204ENST00000397099 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
SEC13-204ENST00000397099 C16orf90A8MZG2 172 aa9.53□□□□□ -0.88
SEC13-204ENST00000397099 CXCL1P09341 107 aa9.53□□□□□ -0.88
SEC13-204ENST00000397099 DNAH10OSP0CZ25 163 aa9.53□□□□□ -0.88
SEC13-204ENST00000397099 TAGLN2P37802 199 aaKnown RBP9.53□□□□□ -0.88
SEC13-204ENST00000397099 CRIP1P50238 77 aa9.53□□□□□ -0.88
SEC13-204ENST00000397099 SLC51BQ86UW2 128 aa9.53□□□□□ -0.88
SEC13-204ENST00000397099 PHLDA3Q9Y5J5 127 aa9.53□□□□□ -0.88
SEC13-204ENST00000397099 KIAA1109Q2LD37 5005 aa9.53□□□□□ -0.88
SEC13-204ENST00000397099 TRAV8-6A0A0B4J262 113 aa9.52□□□□□ -0.89
SEC13-204ENST00000397099 IFNA1P01562 189 aa9.52□□□□□ -0.89
SEC13-204ENST00000397099 ARMS2P0C7Q2 107 aa9.52□□□□□ -0.89
SEC13-204ENST00000397099 SULT1A2P50226 295 aa9.52□□□□□ -0.89
SEC13-204ENST00000397099 Q6ZNX1 250 aa9.52□□□□□ -0.89
SEC13-204ENST00000397099 BAGE2Q86Y30 109 aa9.52□□□□□ -0.89
SEC13-204ENST00000397099 PARLQ9H300 379 aa9.52□□□□□ -0.89
SEC13-204ENST00000397099 SCO2A0A1W2PP80 73 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 H3BVH4 76 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 M0R036 132 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 EREGO14944 169 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 LINC00315P59091 139 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 ZFP82Q8N141 532 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 SCRT2Q9NQ03 307 aa9.51□□□□□ -0.89
SEC13-204ENST00000397099 IGHV3-38A0A0C4DH36 116 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 A0A1B0GV50 99 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 PDE6DO43924 150 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 AKAP14Q86UN6 197 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 ATP6V0E2Q8NHE4 81 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 C11orf52Q96A22 123 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 GTSF1LQ9H1H1 148 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 GNG13Q9P2W3 67 aa9.5□□□□□ -0.89
SEC13-204ENST00000397099 A0A087WWC5 75 aa9.49□□□□□ -0.89
SEC13-204ENST00000397099 IGHV3-73A0A0B4J1V6 119 aa9.49□□□□□ -0.89
SEC13-204ENST00000397099 LOC100131303A0A0U1RQF7 123 aa9.49□□□□□ -0.89
SEC13-204ENST00000397099 LINC01556Q5JQF7 62 aa9.49□□□□□ -0.89
SEC13-204ENST00000397099 LELP1Q5T871 98 aa9.49□□□□□ -0.89
SEC13-204ENST00000397099 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
SEC13-204ENST00000397099 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
SEC13-204ENST00000397099 CRYGDP07320 174 aa9.48□□□□□ -0.89
SEC13-204ENST00000397099 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
SEC13-204ENST00000397099 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
SEC13-204ENST00000397099 OR10J3Q5JRS4 329 aa9.48□□□□□ -0.89
SEC13-204ENST00000397099 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
SEC13-204ENST00000397099 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
SEC13-204ENST00000397099 WFDC10BQ8IUB3 73 aa9.48□□□□□ -0.89
SEC13-204ENST00000397099 BIN3Q9NQY0 253 aa9.48□□□□□ -0.89
SEC13-204ENST00000397099 MSRB1Q9NZV6 116 aa9.48□□□□□ -0.89
SEC13-204ENST00000397099 TRBV10-1A0A0K0K1A3 114 aa9.47□□□□□ -0.89
SEC13-204ENST00000397099 GRIFINA4D1Z8 144 aa9.47□□□□□ -0.89
SEC13-204ENST00000397099 MEF2BQ02080 365 aaPredicted RBP9.47□□□□□ -0.89
SEC13-204ENST00000397099 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms