RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 STAB1Q9NY15 2570 aa9.27□□□□□ -0.92
TRIM39-204ENST00000396548 H3BVH4 76 aa9.27□□□□□ -0.93
TRIM39-204ENST00000396548 APCSP02743 223 aa9.27□□□□□ -0.93
TRIM39-204ENST00000396548 DEFB125Q8N687 156 aa9.27□□□□□ -0.93
TRIM39-204ENST00000396548 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
TRIM39-204ENST00000396548 MUC4Q99102 2169 aa9.27□□□□□ -0.93
TRIM39-204ENST00000396548 SNRPEP62304 92 aaKnown RBP9.27□□□□□ -0.93
TRIM39-204ENST00000396548 PRR31Q5SQ13 230 aa9.27□□□□□ -0.93
TRIM39-204ENST00000396548 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.93
TRIM39-204ENST00000396548 COA6Q5JTJ3 125 aaKnown RBP9.26□□□□□ -0.93
TRIM39-204ENST00000396548 CACNG7P62955 275 aa9.26□□□□□ -0.93
TRIM39-204ENST00000396548 MDFICQ9P1T7 246 aa9.26□□□□□ -0.93
TRIM39-204ENST00000396548 INSP01308 110 aa9.26□□□□□ -0.93
TRIM39-204ENST00000396548 RAB4BP61018 213 aa9.26□□□□□ -0.93
TRIM39-204ENST00000396548 TWIST1Q15672 202 aa9.26□□□□□ -0.93
TRIM39-204ENST00000396548 BORCS7Q96B45 105 aa9.26□□□□□ -0.93
TRIM39-204ENST00000396548 TMEM191AQ9H0A3 160 aa9.26□□□□□ -0.93
TRIM39-204ENST00000396548 LOC102724200A0A096LPH7 203 aaPredicted RBP9.25□□□□□ -0.93
TRIM39-204ENST00000396548 S100A8P05109 93 aa9.25□□□□□ -0.93
TRIM39-204ENST00000396548 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
TRIM39-204ENST00000396548 RNF185Q96GF1 192 aa9.25□□□□□ -0.93
TRIM39-204ENST00000396548 U3KQK5 164 aa9.25□□□□□ -0.93
TRIM39-204ENST00000396548 SPRY2O43597 315 aa9.25□□□□□ -0.93
TRIM39-204ENST00000396548 KIAA1644Q3SXP7 199 aa9.25□□□□□ -0.93
TRIM39-204ENST00000396548 GTSCR1Q86UQ5 136 aa9.25□□□□□ -0.93
TRIM39-204ENST00000396548 FAM104BQ5XKR9 115 aa9.24□□□□□ -0.93
TRIM39-204ENST00000396548 MORN3Q6PF18 240 aaPredicted RBP9.24□□□□□ -0.93
TRIM39-204ENST00000396548 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
TRIM39-204ENST00000396548 XCL2Q9UBD3 114 aa9.24□□□□□ -0.93
TRIM39-204ENST00000396548 PRM2P04554 102 aa9.24□□□□□ -0.93
TRIM39-204ENST00000396548 KRTAP10-11P60412 298 aa9.24□□□□□ -0.93
TRIM39-204ENST00000396548 C11orf72Q8NBR9 251 aa9.24□□□□□ -0.93
TRIM39-204ENST00000396548 Q0VG73 95 aa9.24□□□□□ -0.93
TRIM39-204ENST00000396548 UBE2CO00762 179 aa9.23□□□□□ -0.93
TRIM39-204ENST00000396548 LINC00310P59036 64 aa9.23□□□□□ -0.93
TRIM39-204ENST00000396548 NUTF2P61970 127 aaKnown RBP9.23□□□□□ -0.93
TRIM39-204ENST00000396548 IL17DQ8TAD2 202 aa9.23□□□□□ -0.93
TRIM39-204ENST00000396548 MDFIQ99750 246 aa9.23□□□□□ -0.93
TRIM39-204ENST00000396548 TMEM256Q8N2U0 113 aa9.23□□□□□ -0.93
TRIM39-204ENST00000396548 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 RAB4AP20338 218 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 HOXA5P20719 270 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 NDUFA6P56556 154 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 SSTP61278 116 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 POM121L12Q8N7R1 296 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 KIF25-AS1Q9Y6Z4 181 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 COL6A5A8TX70 2615 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 S100A6P06703 90 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 RPL35AP18077 110 aaKnown RBP9.22□□□□□ -0.93
TRIM39-204ENST00000396548 S100A4P26447 101 aaKnown RBP9.22□□□□□ -0.93
TRIM39-204ENST00000396548 OXLD1Q5BKU9 147 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 PTH2Q96A98 100 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 IFITM10A6NMD0 228 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 SRIP30626 198 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 MRPL51Q4U2R6 128 aaKnown RBP9.22□□□□□ -0.93
TRIM39-204ENST00000396548 OR10J3Q5JRS4 329 aa9.22□□□□□ -0.93
TRIM39-204ENST00000396548 ZNF705AQ6ZN79 300 aaPredicted RBP9.22□□□□□ -0.93
TRIM39-204ENST00000396548 CBY3A6NI87 242 aa9.21□□□□□ -0.93
TRIM39-204ENST00000396548 EVI2AP22794 236 aa9.21□□□□□ -0.93
TRIM39-204ENST00000396548 SPANXN1Q5VSR9 72 aa9.21□□□□□ -0.93
TRIM39-204ENST00000396548 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.93
TRIM39-204ENST00000396548 AZU1P20160 251 aa9.21□□□□□ -0.94
TRIM39-204ENST00000396548 LINC00315P59091 139 aa9.21□□□□□ -0.94
TRIM39-204ENST00000396548 C18orf32Q8TCD1 76 aa9.21□□□□□ -0.94
TRIM39-204ENST00000396548 TIMM8BQ9Y5J9 83 aaPredicted RBP9.21□□□□□ -0.94
TRIM39-204ENST00000396548 LINC01587Q99440 93 aa9.2□□□□□ -0.94
TRIM39-204ENST00000396548 ESDP10768 282 aa9.2□□□□□ -0.94
TRIM39-204ENST00000396548 M0R381 172 aa9.2□□□□□ -0.94
TRIM39-204ENST00000396548 NUPR1O60356 82 aa9.2□□□□□ -0.94
TRIM39-204ENST00000396548 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
TRIM39-204ENST00000396548 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
TRIM39-204ENST00000396548 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
TRIM39-204ENST00000396548 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
TRIM39-204ENST00000396548 C1QTNF4Q9BXJ3 329 aa9.19□□□□□ -0.94
TRIM39-204ENST00000396548 CSTL1Q9H114 145 aa9.19□□□□□ -0.94
TRIM39-204ENST00000396548 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
TRIM39-204ENST00000396548 SMIM6P0DI80 62 aa9.19□□□□□ -0.94
TRIM39-204ENST00000396548 PIK3CD-AS1Q5SR53 167 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 SAMD5Q5TGI4 173 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 RCHY1Q96PM5 261 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 JPT2Q9H910 190 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 KIR2DL5BA0A0G2JN68 375 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 KIR2DL5BA0A0G2JPC4 375 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 D6R8Y8 96 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 IQCJQ1A5X6 159 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 UFSP1Q6NVU6 142 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 KIR2DL5AQ8N109 375 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 KIR2DL5BQ8NHK3 375 aa9.18□□□□□ -0.94
TRIM39-204ENST00000396548 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
TRIM39-204ENST00000396548 A8MZ25 164 aa9.17□□□□□ -0.94
TRIM39-204ENST00000396548 DPH3P1Q9H4G8 78 aa9.17□□□□□ -0.94
TRIM39-204ENST00000396548 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
TRIM39-204ENST00000396548 A0A1B0GV90 55 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 G3V4G9 280 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 CRYGDP07320 174 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 HTN1P15515 57 aa9.16□□□□□ -0.94
TRIM39-204ENST00000396548 C14orf178Q8N769 122 aaPredicted RBP9.16□□□□□ -0.94
TRIM39-204ENST00000396548 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
TRIM39-204ENST00000396548 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms