RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZC2HC1AQ96GY0 325 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 RCHY1Q96PM5 261 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 SMIM2Q9BVW6 85 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 SMIM9A6NGZ8 99 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 SIGLEC8Q9NYZ4 499 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 C19orf71A6NCJ1 209 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 C2orf70A6NJV1 201 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 RPL13AP40429 203 aaKnown RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 PATE2Q6UY27 113 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 Q6ZVH6 145 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 HLA-DRB4P13762 266 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 EVI2AP22794 236 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 C9orf66Q5T8R8 295 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 HLA-DRB4X5D2U9 266 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3-66A0A0C4DH42 116 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 M0R2P5 195 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 IGLV1-40P01703 118 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 LGALS3P17931 250 aaKnown RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 DEFB131AP59861 70 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM170BQ5T4T1 132 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 A0A087WX48 190 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 RNASE1P07998 156 aaKnown RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 NPSP0C0P6 89 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 PRB3Q04118 309 aaPredicted RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 TNFRSF6BO95407 300 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 DAZ2Q13117 558 aaKnown RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 LGALS9BQ3B8N2 356 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 LGALS9CQ6DKI2 356 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 TEX43Q6ZNM6 134 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 NEGR1Q7Z3B1 354 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 DAZ4Q86SG3 579 aaKnown RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 DAZ3Q9NR90 486 aaKnown RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 SDHAF1A6NFY7 115 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 J3KRW8 73 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 PRSS2P07478 247 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 IGF2BP2-AS1Q96M15 143 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 ZFAND3Q9H8U3 227 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 I3L3M4 83 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 CRXO43186 299 aaPredicted RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 EGR2P11161 476 aaPredicted RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 KLK9Q2XQG4 91 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 TDRG1Q3Y452 100 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 PYY3Q5JQD4 70 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 Q8TAT8 98 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 HIST1H4GQ99525 98 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 SSBP4Q9BWG4 385 aaPredicted RBP2.61□□□□□ -1.99
VPS13C-203ENST00000395896 GSN-AS1Q9NRJ2 163 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 KLK9Q9UKQ9 250 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 MRGPRG-AS1Q2M3A8 158 aa2.61□□□□□ -1.99
VPS13C-203ENST00000395896 TRGV4A0A0C4DH28 118 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 TRAV12-3A0A0B4J271 114 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 HILS1P60008 231 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 SSBP2P81877 361 aaPredicted RBP2.6□□□□□ -1.99
VPS13C-203ENST00000395896 CD33P20138 364 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 FAM19A2Q8N3H0 131 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 Q8N8P6 123 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 IGKV3-20P01619 116 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 IGKCP01834 107 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 A0A0J9YX75 114 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 SCGB1C2P0DMR2 95 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 MUC21Q5SSG8 566 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 C14orf178Q8N769 122 aaPredicted RBP2.6□□□□□ -1.99
VPS13C-203ENST00000395896 GLMPQ8WWB7 406 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 SIVA1O15304 175 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV4-31P0DP07 118 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 C2orf66Q6UXQ4 117 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 C19orf84I3L1E1 186 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 HSD52Q0P140 79 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 DYNAPQ8N1N2 210 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 CCL25O15444 150 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 DNAL4O96015 105 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM158Q8WZ71 300 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 CELSR1Q9NYQ6 3014 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 TENM4Q6N022 2769 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3OR16-12A0A075B7B8 117 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 OR5A1Q8NGJ0 315 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 HINT1P49773 126 aaPredicted RBP2.6□□□□□ -1.99
VPS13C-203ENST00000395896 PLEKHB2Q96CS7 222 aa2.6□□□□□ -1.99
VPS13C-203ENST00000395896 TRGV1A0A0A0MS02 117 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 PKIGQ9Y2B9 76 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 A0A1B0GXF2 115 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 K7EN84 100 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 RPL24P83731 157 aaKnown RBP2.59□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM263Q8WUH6 116 aaKnown RBP2.59□□□□□ -1.99
VPS13C-203ENST00000395896 RITA1Q96K30 269 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 CCDC140Q96MF4 163 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 SPANXA1Q9NS26 97 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM213A2RRL7 107 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 K7EQG2 157 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 RPL32P62910 135 aaKnown RBP2.59□□□□□ -1.99
VPS13C-203ENST00000395896 SPINK13Q1W4C9 94 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 C18orf15Q96N68 181 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 NCR2O95944 276 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 PMVKQ15126 192 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 VGLL1Q99990 258 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 NDUFA11Q86Y39 141 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 C16orf74Q96GX8 76 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 TIMM17AQ99595 171 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.59□□□□□ -1.99
VPS13C-203ENST00000395896 LINC00469Q8N7U9 141 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms