RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 IGLC6P0CF74 106 aa13.27□□□□□ -0.28
SREBF1-203ENST00000395751 PCNX2A6NKB5 2137 aa13.27□□□□□ -0.28
SREBF1-203ENST00000395751 MBD3L4A6NDZ8 208 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-203ENST00000395751 MBD3L3A6NE82 208 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-203ENST00000395751 MBD3L5A6NJ08 208 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-203ENST00000395751 PFN2P35080 140 aa13.27□□□□□ -0.28
SREBF1-203ENST00000395751 MBD3L2Q8NHZ7 208 aaPredicted RBP13.27□□□□□ -0.28
SREBF1-203ENST00000395751 TIMM17AQ99595 171 aa13.27□□□□□ -0.28
SREBF1-203ENST00000395751 IGHV1OR15-1A0A075B7D0 117 aa13.27□□□□□ -0.29
SREBF1-203ENST00000395751 I3L2K1 104 aa13.27□□□□□ -0.29
SREBF1-203ENST00000395751 STHQ8IWL8 128 aa13.27□□□□□ -0.29
SREBF1-203ENST00000395751 C8orf31Q8N9H6 132 aa13.27□□□□□ -0.29
SREBF1-203ENST00000395751 Q9H8V8 135 aa13.27□□□□□ -0.29
SREBF1-203ENST00000395751 PCNX3Q9H6A9 2034 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 TRAV4A0A0B4J268 109 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 NDUFA7O95182 113 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 IGLV1-44P01699 117 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 TMEM219Q86XT9 240 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 ACACAQ13085 2346 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 COL6A6A6NMZ7 2263 aa13.26□□□□□ -0.29
SREBF1-203ENST00000395751 ZNF106Q9H2Y7 1883 aaKnown RBP13.26□□□□□ -0.29
SREBF1-203ENST00000395751 GNRH2O43555 120 aa13.25□□□□□ -0.29
SREBF1-203ENST00000395751 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
SREBF1-203ENST00000395751 ORMDL1Q9P0S3 153 aa13.25□□□□□ -0.29
SREBF1-203ENST00000395751 K7EIM0 57 aa13.25□□□□□ -0.29
SREBF1-203ENST00000395751 CRLF1O75462 422 aa13.25□□□□□ -0.29
SREBF1-203ENST00000395751 H0YGX0 51 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 OVOL3O00110 214 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 ATP6V0E1O15342 81 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 IGLV3-9A0A075B6K5 115 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 IGHG2P01859 326 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 hADV29S1A0JD25 119 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 SPRY2O43597 315 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 PROP1O75360 226 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 M0QXV9 152 aa13.24□□□□□ -0.29
SREBF1-203ENST00000395751 THBDP07204 575 aa13.23□□□□□ -0.29
SREBF1-203ENST00000395751 IGFBPL1Q8WX77 278 aa13.23□□□□□ -0.29
SREBF1-203ENST00000395751 DSCR8Q96T75 97 aa13.23□□□□□ -0.29
SREBF1-203ENST00000395751 PSMB8P28062 276 aa13.23□□□□□ -0.29
SREBF1-203ENST00000395751 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
SREBF1-203ENST00000395751 IGKV1D-37A0A075B6S9 117 aa13.23□□□□□ -0.29
SREBF1-203ENST00000395751 SPINK13Q1W4C9 94 aa13.23□□□□□ -0.29
SREBF1-203ENST00000395751 SLC25A29Q8N8R3 303 aa13.23□□□□□ -0.29
SREBF1-203ENST00000395751 FAM110AQ9BQ89 295 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 GPR179Q6PRD1 2367 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 TMEM105Q8N8V8 129 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 IMUPQ9GZP8 106 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 C7orf69Q9H7B7 122 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 KLK9Q9UKQ9 250 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 CRYGCP07315 174 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 F6UB75 175 aa13.22□□□□□ -0.29
SREBF1-203ENST00000395751 Q6Q795 121 aa13.21□□□□□ -0.29
SREBF1-203ENST00000395751 NACAE9PAV3 2078 aa13.21□□□□□ -0.29
SREBF1-203ENST00000395751 E7EUB6 86 aa13.21□□□□□ -0.3
SREBF1-203ENST00000395751 IGHV3-53P01767 116 aa13.21□□□□□ -0.3
SREBF1-203ENST00000395751 UBE2E1P51965 193 aa13.21□□□□□ -0.3
SREBF1-203ENST00000395751 BRK1Q8WUW1 75 aa13.21□□□□□ -0.3
SREBF1-203ENST00000395751 SUMO4Q6EEV6 95 aa13.2□□□□□ -0.3
SREBF1-203ENST00000395751 HOXD3P31249 432 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-203ENST00000395751 MSRB2Q9Y3D2 182 aa13.2□□□□□ -0.3
SREBF1-203ENST00000395751 NOTCH4Q99466 2003 aa13.2□□□□□ -0.3
SREBF1-203ENST00000395751 A0A0J9YY99 117 aa13.2□□□□□ -0.3
SREBF1-203ENST00000395751 G3V318 75 aa13.2□□□□□ -0.3
SREBF1-203ENST00000395751 INSP01308 110 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 ATP5J2P56134 94 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 KIAA1549Q9HCM3 1950 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 IGHV3-38A0A0C4DH36 116 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 P0DMU3 169 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 FAM231AP0DMU4 169 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 FAM231CP0DMU5 169 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 COL8A2P25067 703 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 LRRC75A-AS1Q8N1F1 130 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 U3KQK5 164 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 URB1-AS1Q96HZ7 61 aa13.19□□□□□ -0.3
SREBF1-203ENST00000395751 NDUFA4O00483 81 aa13.18□□□□□ -0.3
SREBF1-203ENST00000395751 LHBP01229 141 aa13.18□□□□□ -0.3
SREBF1-203ENST00000395751 EIF4EBP1Q13541 118 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-203ENST00000395751 SS18Q15532 418 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 MRPS12O15235 138 aaKnown RBP13.17□□□□□ -0.3
SREBF1-203ENST00000395751 IGHV3-33P01772 117 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 NEXN-AS1Q8NBZ9 246 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 PCDH15Q96QU1 1955 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 TRAV12-2A0A075B6T6 113 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 CENPVL3A0A0U1RRI6 287 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 WI2-2373I1.2A0A1W2PRP0 233 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 LINC01619G3V211 115 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 KAAG1Q9UBP8 84 aa13.17□□□□□ -0.3
SREBF1-203ENST00000395751 PRAC2D3DTV9 90 aa13.16□□□□□ -0.3
SREBF1-203ENST00000395751 ZNRF2Q8NHG8 242 aa13.16□□□□□ -0.3
SREBF1-203ENST00000395751 IGHV3-16A0A0C4DH30 117 aa13.16□□□□□ -0.3
SREBF1-203ENST00000395751 ADAMTS9Q9P2N4 1935 aa13.16□□□□□ -0.3
SREBF1-203ENST00000395751 DAND5Q8N907 189 aa13.16□□□□□ -0.3
SREBF1-203ENST00000395751 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
SREBF1-203ENST00000395751 Q8N7P7 452 aa13.16□□□□□ -0.3
SREBF1-203ENST00000395751 MYCNOSP40205 109 aa13.15□□□□□ -0.3
SREBF1-203ENST00000395751 BUB3O43684 328 aa13.15□□□□□ -0.31
SREBF1-203ENST00000395751 NXPH4O95158 308 aa13.15□□□□□ -0.31
SREBF1-203ENST00000395751 SAA4P35542 130 aa13.15□□□□□ -0.31
SREBF1-203ENST00000395751 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms