RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-208	ENST00000395727	IGHV3-16	A0A0C4DH30	117 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727		K7EQM0	130 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727		M0R2P5	195 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	CXorf1	O96002	111 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	IGLV2-11	P01706	119 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	TYMS	P04818	313 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	GCHFR	P30047	84 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	TMEM183B	Q1AE95	376 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	MUC21	Q5SSG8	566 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	GOLT1A	Q6ZVE7	132 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	NEGR1	Q7Z3B1	354 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	SH2D6	Q7Z4S9	175 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	TMEM183A	Q8IXX5	376 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	TMEM75	Q8N9X5	138 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	HSD17B11	Q8NBQ5	300 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	TVP23C	Q96ET8	276 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	HYLS1	Q96M11	299 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	KRTAP17-1	Q9BYP8	105 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	NKX6-2	Q9C056	277 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	SDF2L1	Q9HCN8	221 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	TREM1	Q9NP99	234 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	MDFIC	Q9P1T7	246 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	DNAH17	Q9UFH2	4485 aa		4.18	□□□□□ -1.74
PTPN20-208	ENST00000395727	PKD1	P98161	4303 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	TRAV8-1	A0A0A6YYK1	113 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	TRGV4	A0A0C4DH28	118 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	CTXND1	A0A1B0GTU2	59 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	GGTLC3	B5MD39	225 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727		C9JCJ5	164 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727		G3V3Q6	166 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727		K7EQD1	137 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	TAAR5	O14804	337 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	NXPH4	O95158	308 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	PFN1	P07737	140 aa	Known RBP	4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	DNAH10OS	P0CZ25	163 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	LINC00315	P59091	139 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	FLI1	Q01543	452 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	ZFP69	Q49AA0	526 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	SAPCD1	Q5SSQ6	148 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	LYPD5	Q6UWN5	251 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	COX8C	Q7Z4L0	72 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	NFE4	Q86UQ8	179 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	CYB561D1	Q8N8Q1	229 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	ZNF479	Q96JC4	524 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	C9orf85	Q96MD7	179 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	TXNDC17	Q9BRA2	123 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	TCEAL7	Q9BRU2	100 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	EPDR1	Q9UM22	224 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	ARL2-SNX15	V9GYD0	113 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	MUC4	Q99102	2169 aa		4.17	□□□□□ -1.74
PTPN20-208	ENST00000395727	HERC2	O95714	4834 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	TRAV9-2	A0A087WT02	112 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	TRBV6-4	A0A1B0GX49	114 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	GAGE12J	A6NER3	117 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	C16orf90	A8MZG2	172 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727		F6UZH7	168 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	HMGB3	O15347	200 aa	Known RBP	4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	IGHV3-53	P01767	116 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	GATA1	P15976	413 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	SRI	P30626	198 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	GNG5	P63218	68 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	ZNF345	Q14585	488 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	SMUG1	Q53HV7	270 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727		Q5BKY6	102 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	DNLZ	Q5SXM8	178 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	RPL7L1	Q6DKI1	246 aa	Known RBP	4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	C10orf126	Q8N4M7	172 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	OR4C5	Q8NGB2	326 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	OR2T35	Q8NGX2	323 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	PCNP	Q8WW12	178 aa	Known RBP	4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	HIST1H2BA	Q96A08	127 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	SH3BGRL3	Q9H299	93 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	RPH3AL	Q9UNE2	315 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	PSG8	Q9UQ74	426 aa		4.16	□□□□□ -1.74
PTPN20-208	ENST00000395727	DNAH11	Q96DT5	4516 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	FXYD6-FXYD2	A0A087WZ82	144 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727		A0A0A0MQY5	61 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	TRBV6-1	A0A0K0K1D8	114 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	RS1	O15537	224 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	GNRH2	O43555	120 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	EIF3G	O75821	320 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	GCG	P01275	180 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	SFTA3	P0C7M3	94 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	MGST1	P10620	155 aa	Known RBP	4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	RNASE3	P12724	160 aa	Known RBP	4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	FHIT	P49789	147 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	PPT1	P50897	306 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	ZNF80	P51504	273 aa	Predicted RBP	4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	RHOH	Q15669	191 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	ZNF726P1	Q15940	193 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	RGS21	Q2M5E4	152 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	ZFP2	Q6ZN57	461 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	CTDSP1	Q9GZU7	261 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	NAGK	Q9UJ70	344 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	LY96	Q9Y6Y9	160 aa		4.15	□□□□□ -1.75
PTPN20-208	ENST00000395727	KIAA1109	Q2LD37	5005 aa		4.14	□□□□□ -1.75
PTPN20-208	ENST00000395727	FAM74A7	A6NL05	159 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms