RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 PRO1854Q9UHT4 67 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 ZGRF1Q86YA3 2104 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 ASH1LQ9NR48 2969 aaKnown RBP4.82□□□□□ -1.64
NXF3-201ENST00000395065 CCDC179H3BU77 68 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 M0R381 172 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 CRLF1O75462 422 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 SNCGO76070 127 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 CTSGP08311 255 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 P0DMU3 169 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 FAM231AP0DMU4 169 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 FAM231CP0DMU5 169 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 RPL13AP40429 203 aaKnown RBP4.82□□□□□ -1.64
NXF3-201ENST00000395065 IGFL3Q6UXB1 125 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 C2orf66Q6UXQ4 117 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 KLHL30-AS1Q8NEE0 82 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 AGPAT4-IT1Q9H0P7 198 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 HIF1ANQ9NWT6 349 aa4.82□□□□□ -1.64
NXF3-201ENST00000395065 CFAP46Q8IYW2 2715 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 HELZ2Q9BYK8 2649 aaKnown RBP4.81□□□□□ -1.64
NXF3-201ENST00000395065 PIEZO2Q9H5I5 2752 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 TACC2O95359 2948 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 IGLV4-69A0A075B6H9 119 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 IGHV1-69DA0A0B4J2H0 117 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 NBR2O15453 112 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 BUB3O43684 328 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 CRIP2P52943 208 aaPredicted RBP4.81□□□□□ -1.64
NXF3-201ENST00000395065 DLX1P56177 255 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 SPANXN1Q5VSR9 72 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 Q8N1Y9 231 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 MRPL53Q96EL3 112 aaKnown RBP4.81□□□□□ -1.64
NXF3-201ENST00000395065 ODF3Q96PU9 254 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 AMELXQ99217 191 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 S4R3C0 116 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 LRBAP50851 2863 aa4.81□□□□□ -1.64
NXF3-201ENST00000395065 CSMD1Q96PZ7 3565 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 DCHS2Q6V1P9 2916 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 TRAV8-2A0A0B4J237 113 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 H3BVH4 76 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 EIF4EBP3O60516 100 aaPredicted RBP4.8□□□□□ -1.64
NXF3-201ENST00000395065 TSHBP01222 138 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 IGHV3-33P01772 117 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 MRPL23Q16540 153 aaKnown RBP4.8□□□□□ -1.64
NXF3-201ENST00000395065 TTC32Q5I0X7 151 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 C9orf47Q6ZRZ4 202 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 Q6ZS46 218 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 POM121L12Q8N7R1 296 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 ONECUT1Q9UBC0 465 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 TNFRSF18Q9Y5U5 241 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 APC2O95996 2303 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 PCNX1Q96RV3 2341 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 A0A0B4J2C4 111 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 IGIPA6NJ69 53 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 C11orf86A6NJI1 115 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 C9JAW5 83 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 TIMM23O14925 209 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 SCGB2A1O75556 95 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 PRTN3P24158 256 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 HERVK_113P61574 105 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 KLK9Q2XQG4 91 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 SMIM20Q8N5G0 67 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 FAM57AQ8TBR7 257 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 TMEM263Q8WUH6 116 aaKnown RBP4.8□□□□□ -1.64
NXF3-201ENST00000395065 RNASE6Q93091 150 aaKnown RBP4.8□□□□□ -1.64
NXF3-201ENST00000395065 TIMD4Q96H15 378 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 KLK15Q9H2R5 256 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 KLK9Q9UKQ9 250 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 LENEPQ9Y5L5 61 aa4.8□□□□□ -1.64
NXF3-201ENST00000395065 ROS1P08922 2347 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 A0A0G2JNJ9 132 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 PPP1R17O96001 155 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 TSPEAR-AS2P59090 65 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 ANXA2RQ3ZCQ2 193 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 GPHB5Q86YW7 130 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 OR10J6PQ8NGY7 276 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
NXF3-201ENST00000395065 DPH3P1Q9H4G8 78 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 Q9UFV3 132 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 ACACAQ13085 2346 aa4.79□□□□□ -1.64
NXF3-201ENST00000395065 IGHV4OR15-8A0A075B7B6 117 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 A0A087WW49 117 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 TRBV10-2A0A0K0K1G8 114 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 A4D1N5 150 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 DUSP14O95147 198 aaKnown RBP4.78□□□□□ -1.64
NXF3-201ENST00000395065 BRI3O95415 125 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 GHRHP01286 108 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 MED14OSP0DP75 135 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 PRB3Q04118 309 aaPredicted RBP4.78□□□□□ -1.64
NXF3-201ENST00000395065 BSPH1Q075Z2 132 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 PMVKQ15126 192 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 FAM159AQ6UWV7 190 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 Q6ZQT7 251 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 TRPT1Q86TN4 253 aaKnown RBP4.78□□□□□ -1.64
NXF3-201ENST00000395065 RNF182Q8N6D2 247 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 RPL39LQ96EH5 51 aaKnown RBP4.78□□□□□ -1.64
NXF3-201ENST00000395065 BBC3Q96PG8 261 aaPredicted RBP4.78□□□□□ -1.64
NXF3-201ENST00000395065 PKDREJQ9NTG1 2253 aa4.78□□□□□ -1.64
NXF3-201ENST00000395065 TRBV30A0A0K0K1B3 111 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms