RNA–Protein interactions for RNA: ENST00000394939.3

GTF2IRD2B-201, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-201ENST00000394939 SYT8Q8NBV8 401 aa8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 IL17DQ8TAD2 202 aa8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 C9orf85Q96MD7 179 aa8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 CARHSP1Q9Y2V2 147 aaKnown RBP8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 TGP01266 2768 aa8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 F2Z2F3 143 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 SPINK4O60575 86 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 ARMS2P0C7Q2 107 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 DAD1P61803 113 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 FER1L6-AS1Q8NA97 138 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 ANAPC16Q96DE5 110 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 NDUFAF3Q9BU61 184 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 TPPP3Q9BW30 176 aa8.67□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 TRGV2A0A075B6R0 118 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 FAM231BA6NCW3 169 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 ZFP82Q8N141 532 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 SVBPQ8N300 66 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 TSKUQ8WUA8 353 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 PTH2Q96A98 100 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 GFRA4Q9GZZ7 299 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 V9GYV3 84 aa8.66□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 GAGE12BA1L429 117 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 SNAI2O43623 268 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 GAGE7O76087 117 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 APOC3P02656 99 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 IGLC6P0CF74 106 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 GAGE12FP0CL80 117 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 GAGE12GP0CL81 117 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 GAGE12IP0CL82 117 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 GZMBP10144 247 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 CACNG7P62955 275 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 RHEBQ15382 184 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 RNF212Q495C1 297 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 ZNF876PQ49A33 203 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 Q6ZTI0 123 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 RASL10AQ92737 203 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 SSBP4Q9BWG4 385 aaPredicted RBP8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 SCRT2Q9NQ03 307 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 CELA1Q9UNI1 258 aa8.65□□□□□ -1.02
GTF2IRD2B-201ENST00000394939 SNAPINO95295 136 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 WDR73Q6P4I2 378 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 LINC00612Q8N6U2 182 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 NAT8BQ9UHF3 227 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 DNAH9Q9NYC9 4486 aa8.64□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 M0R381 172 aa8.63□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 CTRLP40313 264 aa8.63□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 NANOS2P60321 138 aaKnown RBP8.63□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 C12orf74Q32Q52 190 aa8.63□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 LYZL1Q6UWQ5 148 aa8.63□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 C18orf15Q96N68 181 aa8.63□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 MUC4Q99102 2169 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 HIGD1CA8MV81 97 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 A8MWV9 139 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 CIDEAO60543 219 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 NXPH4O95158 308 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 ATP5G1P05496 136 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 OR4C5Q8NGB2 326 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 OR10AG1Q8NH19 301 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 HUWE1Q7Z6Z7 4374 aaKnown RBP8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 A0A087WWC5 75 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 TRAV4A0A0B4J268 109 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 SMIM27A0A1W2PRY6 76 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 C7orf77A4D0Y5 90 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 AP1S3Q96PC3 154 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 CNFNQ9BYD5 112 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 TMEM242Q9NWH2 141 aa8.61□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 IGHV4-4A0A075B6R2 117 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 MUC21A0A0G2JKD1 596 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 MUC21A0A140T8X8 626 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 A0A1B0GUT8 65 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 RHODO00212 210 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 RS1O15537 224 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 TRGC1P0CF51 173 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 SMIM17P0DL12 118 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 SSTP61278 116 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 RIGQ13278 110 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 TWIST1Q15672 202 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 KCNIP4Q6PIL6 250 aa8.6□□□□□ -1.03
GTF2IRD2B-201ENST00000394939 Q6ZTC4 211 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms