RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 GAGE12FP0CL80 117 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 GAGE12GP0CL81 117 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 GAGE12IP0CL82 117 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 RPL35AP18077 110 aaKnown RBP10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 GAGE4Q13068 117 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 SPATA45Q537H7 98 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 CR1P17927 2039 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 SH2D1AO60880 128 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 CRLF1O75462 422 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 TMEM89A2RUT3 159 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 HILS1P60008 231 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 KRTDAPP60985 99 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 KRTAP1-3Q8IUG1 177 aa10.69□□□□□ -0.7
PPP3CA-202ENST00000394853 NRN1Q9NPD7 142 aa10.68□□□□□ -0.7
PPP3CA-202ENST00000394853 ORM1P02763 201 aa10.68□□□□□ -0.7
PPP3CA-202ENST00000394853 COL6A5A8TX70 2615 aa10.68□□□□□ -0.7
PPP3CA-202ENST00000394853 LOC107984640A0A0U1RRK4 108 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 TRBV20-1A0A075B6N2 111 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 NPIPB6E9PJ23 425 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 TINCRA0A1B0GVN0 87 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 LINC01619G3V211 115 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 CRIP2P52943 208 aaPredicted RBP10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 SLURP1P55000 103 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 TCTAP57738 103 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 LINC01006Q8NI28 216 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 C18orf32Q8TCD1 76 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 KLK9Q9UKQ9 250 aa10.67□□□□□ -0.7
PPP3CA-202ENST00000394853 TRAV8-2A0A0B4J237 113 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 A0A1B0GXF2 115 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 CD28P10747 220 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 HOXD3P31249 432 aaPredicted RBP10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 FOXE3Q13461 319 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 FAM162BQ5T6X4 162 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 EBLN2Q6P2I7 272 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 HIVEP1P15822 2718 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 CCL24O00175 119 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 Q0VG73 95 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 Q6ZWC4 215 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 IL17DQ8TAD2 202 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 CSN3P07498 182 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 ZNF688P0C7X2 276 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 OR10J3Q5JRS4 329 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 Q6ZQT7 251 aa10.66□□□□□ -0.7
PPP3CA-202ENST00000394853 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 HSBP1O75506 76 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 LYZL1Q6UWQ5 148 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 WIPF2Q8TF74 440 aaPredicted RBP10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 AGPAT4-IT1Q9H0P7 198 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 ESM1Q9NQ30 184 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 ZNF138P52744 262 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 RPS20P60866 119 aaKnown RBP10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 PMCHL1Q16048 86 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 ATP5L2Q7Z4Y8 100 aa10.65□□□□□ -0.7
PPP3CA-202ENST00000394853 TMEM213A2RRL7 107 aa10.65□□□□□ -0.71
PPP3CA-202ENST00000394853 ZNF561-AS1K7EIQ3 104 aa10.65□□□□□ -0.71
PPP3CA-202ENST00000394853 IGLV1-40P01703 118 aa10.65□□□□□ -0.71
PPP3CA-202ENST00000394853 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.71
PPP3CA-202ENST00000394853 ZNF702PQ9H963 129 aa10.65□□□□□ -0.71
PPP3CA-202ENST00000394853 STAB1Q9NY15 2570 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 TRBV6-1A0A0K0K1D8 114 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 NDUFA4O00483 81 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 LYRM7Q5U5X0 104 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 GFRA4Q9GZZ7 299 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 EDA2RQ9HAV5 297 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 C20orf173Q96LM9 149 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 A0A087WW49 117 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 F6UB75 175 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 H3BUA1 57 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 RNASE1P07998 156 aaKnown RBP10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 LGALS1P09382 135 aaKnown RBP10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 S100A4P26447 101 aaKnown RBP10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 UBE2E2Q96LR5 201 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 U3KQE9 123 aa10.64□□□□□ -0.71
PPP3CA-202ENST00000394853 OVOL1O14753 267 aa10.63□□□□□ -0.71
PPP3CA-202ENST00000394853 MRAPQ8TCY5 172 aa10.63□□□□□ -0.71
PPP3CA-202ENST00000394853 A0A087X0K7 114 aa10.63□□□□□ -0.71
PPP3CA-202ENST00000394853 GPX1P07203 203 aa10.63□□□□□ -0.71
PPP3CA-202ENST00000394853 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.63□□□□□ -0.71
PPP3CA-202ENST00000394853 KCNS1Q96KK3 526 aa10.63□□□□□ -0.71
PPP3CA-202ENST00000394853 PSMG4Q5JS54 123 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 CFHR3Q02985 330 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 ATOH7Q8N100 152 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 MGAM2Q2M2H8 2515 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 PSMB8P28062 276 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 RIGQ13278 110 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 ADAMTSL5Q6ZMM2 481 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
PPP3CA-202ENST00000394853 ZNF324O75467 553 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms