RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 BTCP35070 178 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 WISP1O95388 367 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 HOXB4P17483 251 aaPredicted RBP5.89□□□□□ -1.47
SYNE2-205ENST00000394768 TRAV4A0A0B4J268 109 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 K7EP34 96 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 CXCL1P09341 107 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 VWCEQ96DN2 955 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 A0A1W2PPM0 123 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 TFF1P04155 84 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 PRSS57Q6UWY2 283 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 RNF183Q96D59 192 aa5.89□□□□□ -1.47
SYNE2-205ENST00000394768 EML5Q05BV3 1969 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 MUC4Q99102 2169 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 TINCRA0A1B0GVN0 87 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 A4D1N5 150 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 B3GALT5-AS1P59052 145 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 C7orf33Q8WU49 177 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 NPYP01303 97 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 DIRC1Q969H9 104 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 HHLA3Q9XRX5 114 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 ADAMTS9Q9P2N4 1935 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 NAV3Q8IVL0 2385 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 IGHV3-38A0A0C4DH36 116 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 G3V318 75 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 SND1-IT1Q9HBX3 110 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 IGKV1D-8A0A087WSZ0 117 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 RS1O15537 224 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 C4orf3Q8WVX3 66 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 BDP1A6H8Y1 2624 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 ZC2HC1AQ96GY0 325 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 COLCA2A8K830 154 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 IGLC2P0DOY2 106 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 IGLC3P0DOY3 106 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 GFI1Q99684 422 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 OTOGLQ3ZCN5 2332 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 H0Y9J4 135 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 MST1P26927 711 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 C11orf52Q96A22 123 aa5.88□□□□□ -1.47
SYNE2-205ENST00000394768 MYCNOSP40205 109 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 SEM1Q6ZVN7 128 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 IGKV4-1P06312 121 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 LINC00479Q96M42 142 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 Q6ZQT7 251 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 A0A0J9YY99 117 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 CFC1BP0CG36 223 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 CFC1P0CG37 223 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 PSMB8P28062 276 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 GPHB5Q86YW7 130 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 MRPL35Q9NZE8 188 aaKnown RBP5.87□□□□□ -1.47
SYNE2-205ENST00000394768 ZNF706Q9Y5V0 76 aaPredicted RBP5.87□□□□□ -1.47
SYNE2-205ENST00000394768 TNRC6BQ9UPQ9 1833 aaKnown RBP5.87□□□□□ -1.47
SYNE2-205ENST00000394768 A0A096LPF7 62 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 TMEM213A2RRL7 107 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 Q71RC1 249 aaPredicted RBP5.87□□□□□ -1.47
SYNE2-205ENST00000394768 PRSS33Q8NF86 280 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 KLHDC3Q9BQ90 382 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 IGF2-ASQ6U949 168 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 IGLV3-9A0A075B6K5 115 aa5.87□□□□□ -1.47
SYNE2-205ENST00000394768 IGFL4Q6B9Z1 124 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 UPK3BQ9BT76 320 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 USP17L23D6RBM5 183 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 LOXP28300 417 aaPredicted RBP5.86□□□□□ -1.47
SYNE2-205ENST00000394768 NOTCH2Q04721 2471 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 ARHGAP32A7KAX9 2087 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 IGHV1-58A0A0C4DH39 117 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 LY6HO94772 140 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 IGLV1-44P01699 117 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 TRBV12-3P01733 135 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
SYNE2-205ENST00000394768 A0A0B4J2C4 111 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 SS18L2Q9UHA2 77 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 NAA38Q9BRA0 125 aaKnown RBP5.86□□□□□ -1.47
SYNE2-205ENST00000394768 SELENOKQ9Y6D0 94 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 QRFPP83859 136 aa5.86□□□□□ -1.47
SYNE2-205ENST00000394768 TMEM263Q8WUH6 116 aaKnown RBP5.85□□□□□ -1.47
SYNE2-205ENST00000394768 HILS1P60008 231 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 DEFB104AQ8WTQ1 72 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 FGF23Q9GZV9 251 aaPredicted RBP5.85□□□□□ -1.47
SYNE2-205ENST00000394768 LTBP1Q14766 1721 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 GAGE12HA6NDE8 117 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 K7EP13 123 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 NPBQ8NG41 125 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 IGLC1P0CG04 106 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 SMIM9A6NGZ8 99 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 MED14OSP0DP75 135 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 TRAV26-2A0A0B4J265 109 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 H7C423 109 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 FAM120AOSQ5T036 256 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 AMTNQ6UX39 209 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 MAPK1IP1LQ8NDC0 245 aa5.85□□□□□ -1.47
SYNE2-205ENST00000394768 ODF3L1Q8IXM7 274 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 V9GYY9 64 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 ABCA2Q9BZC7 2435 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 C17orf58Q2M2W7 97 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 Q8N1Y9 231 aa5.84□□□□□ -1.47
SYNE2-205ENST00000394768 CYTL1Q9NRR1 136 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms