RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 DEFB112Q30KQ8 113 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 RASL10AQ92737 203 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 JPT2Q9H910 190 aa10.17□□□□□ -0.78
GTF2F1-201ENST00000394456 ZNF469Q96JG9 3925 aaPredicted RBP10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 C9orf118A6NHY6 69 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 MGPP08493 103 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 OR4X2Q8NGF9 303 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 A0A0G2JLM5 398 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 GAGE10A6NGK3 116 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 OCIAD2Q56VL3 154 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 OR9G4Q8NGQ1 327 aa10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 MRPL53Q96EL3 112 aaKnown RBP10.16□□□□□ -0.78
GTF2F1-201ENST00000394456 C9orf139Q6ZV77 190 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 MUC4Q99102 2169 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 SONP18583 2426 aaKnown RBP10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 H3BRM9 83 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 DPM2O94777 84 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 GATA3P23771 443 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 S100A4P26447 101 aaKnown RBP10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 SMIM15Q7Z3B0 74 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 CHAC1Q9BUX1 264 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 RHPN1-AS1Q9BWJ2 59 aa10.15□□□□□ -0.78
GTF2F1-201ENST00000394456 ITPR3Q14573 2671 aa10.15□□□□□ -0.79
GTF2F1-201ENST00000394456 MYO9AB2RTY4 2548 aa10.15□□□□□ -0.79
GTF2F1-201ENST00000394456 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
GTF2F1-201ENST00000394456 OR10J6PQ8NGY7 276 aa10.14□□□□□ -0.79
GTF2F1-201ENST00000394456 PRRC2AP48634 2157 aaKnown RBP10.14□□□□□ -0.79
GTF2F1-201ENST00000394456 HELZ2Q9BYK8 2649 aaKnown RBP10.14□□□□□ -0.79
GTF2F1-201ENST00000394456 NPFFR1Q9GZQ6 430 aa10.14□□□□□ -0.79
GTF2F1-201ENST00000394456 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 A6NDN8 102 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 NDUFA4O00483 81 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 IGKV3-20P01619 116 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 CDKN1BP46527 198 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 MYOZ3Q8TDC0 251 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 Q5PR19 223 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 PHLDA3Q9Y5J5 127 aa10.13□□□□□ -0.79
GTF2F1-201ENST00000394456 AGRNO00468 2067 aa10.12□□□□□ -0.79
GTF2F1-201ENST00000394456 AP1S3Q96PC3 154 aa10.12□□□□□ -0.79
GTF2F1-201ENST00000394456 SIVA1O15304 175 aa10.12□□□□□ -0.79
GTF2F1-201ENST00000394456 LINC00477Q96M19 166 aa10.12□□□□□ -0.79
GTF2F1-201ENST00000394456 A0A087WX48 190 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 TRAV21A0A0B4J279 112 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 IGHV4-31P0DP07 118 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 ASIPP42127 132 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 EMP1P54849 157 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 DEFB113Q30KQ7 82 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 HIST2H2BCQ6DN03 193 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 ATP5LO75964 103 aa10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 SUMO2P61956 95 aaKnown RBP10.11□□□□□ -0.79
GTF2F1-201ENST00000394456 A0A087WWL8 130 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 A0A1W2PPM0 123 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 K7EP34 96 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 IGLV1-40P01703 118 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 USMG5Q96IX5 58 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 FAM19A4Q96LR4 140 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 VPS25Q9BRG1 176 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 HIST2H2BDQ6DRA6 164 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 Q96MF0 132 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
GTF2F1-201ENST00000394456 TRAV12-2A0A075B6T6 113 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 OVOL1O14753 267 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 DUX5Q96PT3 197 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 SPCS1Q9Y6A9 102 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 H3BUA1 57 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 J3QLI3 93 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 CFHR3Q02985 330 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 ATP6V0BQ99437 205 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
GTF2F1-201ENST00000394456 CSTL1Q9H114 145 aa10.08□□□□□ -0.8
GTF2F1-201ENST00000394456 DUSP14O95147 198 aaKnown RBP10.08□□□□□ -0.8
GTF2F1-201ENST00000394456 ZNF688P0C7X2 276 aa10.08□□□□□ -0.8
GTF2F1-201ENST00000394456 SMIM13P0DJ93 91 aa10.08□□□□□ -0.8
GTF2F1-201ENST00000394456 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
GTF2F1-201ENST00000394456 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
GTF2F1-201ENST00000394456 ITPR2Q14571 2701 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 RIPPLY3P57055 190 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 LINC00315P59091 139 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 SMPXQ9UHP9 88 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 RPL39P62891 51 aaKnown RBP10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 CEND1Q8N111 149 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 MTURNQ8N3F0 131 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 BEX4Q9NWD9 120 aaPredicted RBP10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 LENEPQ9Y5L5 61 aa10.07□□□□□ -0.8
GTF2F1-201ENST00000394456 NEXN-AS1Q8NBZ9 246 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms