RNA–Protein interactions for RNA: ENST00000394435.2

PRDM5-202, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,492 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-202ENST00000394435 FAM159AQ6UWV7 190 aa12.48□□□□□ -0.41
PRDM5-202ENST00000394435 JMJD8Q96S16 334 aa12.48□□□□□ -0.41
PRDM5-202ENST00000394435 ZNF580Q9UK33 172 aa12.48□□□□□ -0.41
PRDM5-202ENST00000394435 MUC4Q99102 2169 aa12.48□□□□□ -0.41
PRDM5-202ENST00000394435 CSPG4Q6UVK1 2322 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 TRAV12-3A0A0B4J271 114 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 H3BUT2 72 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 TOMM6Q96B49 74 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 CHAC1Q9BUX1 264 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 FLNCQ14315 2725 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 TGFAP01135 160 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 JPT2Q9H910 190 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 HIGD1BQ9P298 99 aa12.47□□□□□ -0.41
PRDM5-202ENST00000394435 USP9XQ93008 2570 aaPredicted RBP12.47□□□□□ -0.41
PRDM5-202ENST00000394435 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.41
PRDM5-202ENST00000394435 ZNF688P0C7X2 276 aa12.46□□□□□ -0.41
PRDM5-202ENST00000394435 GCSHP23434 173 aa12.46□□□□□ -0.41
PRDM5-202ENST00000394435 C21orf62-AS1Q17RA5 79 aa12.46□□□□□ -0.41
PRDM5-202ENST00000394435 MAPKAPK5-AS1Q8N8E1 139 aa12.46□□□□□ -0.41
PRDM5-202ENST00000394435 IGSF10Q6WRI0 2623 aa12.46□□□□□ -0.42
PRDM5-202ENST00000394435 NEGR1Q7Z3B1 354 aa12.46□□□□□ -0.42
PRDM5-202ENST00000394435 A0A096LNT2 108 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 NXPH4O95158 308 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 IGKV3-20P01619 116 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 CSTL1Q9H114 145 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 KIF25-AS1Q9Y6Z4 181 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 UTP20O75691 2785 aaKnown RBP12.45□□□□□ -0.42
PRDM5-202ENST00000394435 TRAV12-1A0A0B4J245 112 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 GAGE10A6NGK3 116 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 H7C1H1 209 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 PRB1P04280 392 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 CD7P09564 240 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 PLNP26678 52 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 FXYD2P54710 66 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 LINC00315P59091 139 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 C2orf66Q6UXQ4 117 aa12.45□□□□□ -0.42
PRDM5-202ENST00000394435 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
PRDM5-202ENST00000394435 CACNA1AO00555 2505 aa12.44□□□□□ -0.42
PRDM5-202ENST00000394435 F8VRH5 84 aa12.44□□□□□ -0.42
PRDM5-202ENST00000394435 RBX1P62877 108 aa12.44□□□□□ -0.42
PRDM5-202ENST00000394435 POM121L12Q8N7R1 296 aa12.44□□□□□ -0.42
PRDM5-202ENST00000394435 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
PRDM5-202ENST00000394435 A0A087WWL8 130 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 SAMD13Q5VXD3 122 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 NEXN-AS1Q8NBZ9 246 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 TRAV12-2A0A075B6T6 113 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 K7EMI3 77 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 SYNJ2BPP57105 145 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
PRDM5-202ENST00000394435 GAGE12BA1L429 117 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 DUX5Q96PT3 197 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 TMEM89A2RUT3 159 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 J3QLI3 93 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 PPP1R17O96001 155 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 SMIM13P0DJ93 91 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 SUMO4Q6EEV6 95 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 BAALCQ8WXS3 180 aa12.42□□□□□ -0.42
PRDM5-202ENST00000394435 IGHV4OR15-8A0A075B7B6 117 aa12.41□□□□□ -0.42
PRDM5-202ENST00000394435 A0A087WW49 117 aa12.41□□□□□ -0.42
PRDM5-202ENST00000394435 A0A0J9YX75 114 aa12.41□□□□□ -0.42
PRDM5-202ENST00000394435 UFSP1Q6NVU6 142 aa12.41□□□□□ -0.42
PRDM5-202ENST00000394435 CSMD2Q7Z408 3487 aa12.4□□□□□ -0.42
PRDM5-202ENST00000394435 K7EQG2 157 aa12.4□□□□□ -0.42
PRDM5-202ENST00000394435 SNRPD3P62318 126 aaKnown RBP12.4□□□□□ -0.42
PRDM5-202ENST00000394435 F5H697 171 aa12.4□□□□□ -0.42
PRDM5-202ENST00000394435 COTL1Q14019 142 aa12.4□□□□□ -0.42
PRDM5-202ENST00000394435 GTF2H5Q6ZYL4 71 aa12.4□□□□□ -0.42
PRDM5-202ENST00000394435 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
PRDM5-202ENST00000394435 K7ERJ3 54 aa12.39□□□□□ -0.43
PRDM5-202ENST00000394435 LGALS1P09382 135 aaKnown RBP12.39□□□□□ -0.43
PRDM5-202ENST00000394435 CEND1Q8N111 149 aa12.39□□□□□ -0.43
PRDM5-202ENST00000394435 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
PRDM5-202ENST00000394435 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
PRDM5-202ENST00000394435 K7EP34 96 aa12.39□□□□□ -0.43
PRDM5-202ENST00000394435 COX6B1P14854 86 aa12.39□□□□□ -0.43
PRDM5-202ENST00000394435 RNF151Q2KHN1 245 aa12.39□□□□□ -0.43
PRDM5-202ENST00000394435 IGHV3-16A0A0C4DH30 117 aa12.38□□□□□ -0.43
PRDM5-202ENST00000394435 A0A1W2PPM0 123 aa12.38□□□□□ -0.43
PRDM5-202ENST00000394435 DUSP14O95147 198 aaKnown RBP12.38□□□□□ -0.43
PRDM5-202ENST00000394435 SPINK13Q1W4C9 94 aa12.38□□□□□ -0.43
PRDM5-202ENST00000394435 ZNF702PQ9H963 129 aa12.38□□□□□ -0.43
PRDM5-202ENST00000394435 FAM74A4Q5TZK3 123 aa12.38□□□□□ -0.43
PRDM5-202ENST00000394435 ODF3Q96PU9 254 aa12.38□□□□□ -0.43
PRDM5-202ENST00000394435 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
PRDM5-202ENST00000394435 BEX4Q9NWD9 120 aaPredicted RBP12.38□□□□□ -0.43
PRDM5-202ENST00000394435 HOXD3P31249 432 aaPredicted RBP12.37□□□□□ -0.43
PRDM5-202ENST00000394435 POLR2KP53803 58 aaKnown RBP12.37□□□□□ -0.43
PRDM5-202ENST00000394435 OCIAD2Q56VL3 154 aa12.37□□□□□ -0.43
PRDM5-202ENST00000394435 Q6YL49 198 aa12.37□□□□□ -0.43
PRDM5-202ENST00000394435 C9orf85Q96MD7 179 aa12.37□□□□□ -0.43
PRDM5-202ENST00000394435 NHP2Q9NX24 153 aaKnown RBP12.37□□□□□ -0.43
PRDM5-202ENST00000394435 AGRNO00468 2067 aa12.37□□□□□ -0.43
PRDM5-202ENST00000394435 Q8N1Y9 231 aa12.37□□□□□ -0.43
PRDM5-202ENST00000394435 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
PRDM5-202ENST00000394435 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
PRDM5-202ENST00000394435 SAMD5Q5TGI4 173 aa12.36□□□□□ -0.43
PRDM5-202ENST00000394435 ZFP2Q6ZN57 461 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms