RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NRGNQ92686 78 aa14.42□□□□□ -0.1
HOXC6-202ENST00000394331 M0R1W7 72 aa14.42□□□□□ -0.1
HOXC6-202ENST00000394331 TRGV3P03979 118 aa14.42□□□□□ -0.1
HOXC6-202ENST00000394331 PIEZO2Q9H5I5 2752 aa14.42□□□□□ -0.1
HOXC6-202ENST00000394331 CFHR4Q92496 578 aa14.42□□□□□ -0.1
HOXC6-202ENST00000394331 SLC50A1Q9BRV3 221 aa14.42□□□□□ -0.1
HOXC6-202ENST00000394331 PTPRZ1P23471 2315 aaPredicted RBP14.41□□□□□ -0.1
HOXC6-202ENST00000394331 FAM240AA0A1B0GVK7 77 aa14.41□□□□□ -0.1
HOXC6-202ENST00000394331 HERVK_113P61574 105 aa14.41□□□□□ -0.1
HOXC6-202ENST00000394331 NTN5Q8WTR8 489 aaPredicted RBP14.41□□□□□ -0.1
HOXC6-202ENST00000394331 LINC01587Q99440 93 aa14.41□□□□□ -0.1
HOXC6-202ENST00000394331 SPANXDQ9BXN6 97 aa14.41□□□□□ -0.1
HOXC6-202ENST00000394331 MUC6Q6W4X9 2439 aa14.4□□□□□ -0.1
HOXC6-202ENST00000394331 RBAKDNA6NC62 111 aa14.4□□□□□ -0.1
HOXC6-202ENST00000394331 ATXN8Q156A1 80 aa14.4□□□□□ -0.1
HOXC6-202ENST00000394331 PPDPFQ9H3Y8 114 aa14.39□□□□□ -0.11
HOXC6-202ENST00000394331 A0A0B4J2C4 111 aa14.39□□□□□ -0.11
HOXC6-202ENST00000394331 TRBV7-7A0A0K0K1E9 115 aa14.39□□□□□ -0.11
HOXC6-202ENST00000394331 LGALS9O00182 355 aa14.39□□□□□ -0.11
HOXC6-202ENST00000394331 DNAJC30Q96LL9 226 aa14.39□□□□□ -0.11
HOXC6-202ENST00000394331 LY6HO94772 140 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 CRIP2P52943 208 aaPredicted RBP14.38□□□□□ -0.11
HOXC6-202ENST00000394331 TRAV2A0A0B4J234 112 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 ODF3BA8MYP8 253 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 IGHV3-33P01772 117 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 ID1P41134 155 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 UCNP55089 124 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 HES1Q14469 280 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 SPTBN2O15020 2390 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 BSNQ9UPA5 3926 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 IGKV3D-20A0A0C4DH25 116 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 DUSP14O95147 198 aaKnown RBP14.38□□□□□ -0.11
HOXC6-202ENST00000394331 LINC01620Q4KN68 170 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 MSRB2Q9Y3D2 182 aa14.38□□□□□ -0.11
HOXC6-202ENST00000394331 TRAV26-2A0A0B4J265 109 aa14.37□□□□□ -0.11
HOXC6-202ENST00000394331 IGHV7-4-1A0A0J9YVY3 117 aa14.37□□□□□ -0.11
HOXC6-202ENST00000394331 TRBV10-2A0A0K0K1G8 114 aa14.37□□□□□ -0.11
HOXC6-202ENST00000394331 TGFAP01135 160 aa14.37□□□□□ -0.11
HOXC6-202ENST00000394331 KLRB1Q12918 225 aa14.37□□□□□ -0.11
HOXC6-202ENST00000394331 C5orf47Q569G3 176 aa14.37□□□□□ -0.11
HOXC6-202ENST00000394331 ADGRG4Q8IZF6 3080 aa14.37□□□□□ -0.11
HOXC6-202ENST00000394331 ATMQ13315 3056 aa14.36□□□□□ -0.11
HOXC6-202ENST00000394331 MFAP4P55083 255 aa14.36□□□□□ -0.11
HOXC6-202ENST00000394331 H3BMM0 161 aa14.36□□□□□ -0.11
HOXC6-202ENST00000394331 ADORA2A-AS1P86434 159 aa14.36□□□□□ -0.11
HOXC6-202ENST00000394331 TRPT1Q86TN4 253 aaKnown RBP14.36□□□□□ -0.11
HOXC6-202ENST00000394331 KLHL30-AS1Q8NEE0 82 aa14.36□□□□□ -0.11
HOXC6-202ENST00000394331 TMEM263Q8WUH6 116 aaKnown RBP14.36□□□□□ -0.11
HOXC6-202ENST00000394331 UBE2WQ96B02 151 aa14.36□□□□□ -0.11
HOXC6-202ENST00000394331 SMG1Q96Q15 3661 aaKnown RBP14.36□□□□□ -0.11
HOXC6-202ENST00000394331 ABCA1O95477 2261 aa14.36□□□□□ -0.11
HOXC6-202ENST00000394331 M0R2P5 195 aa14.35□□□□□ -0.11
HOXC6-202ENST00000394331 SUMO2P61956 95 aaKnown RBP14.35□□□□□ -0.11
HOXC6-202ENST00000394331 C2orf66Q6UXQ4 117 aa14.35□□□□□ -0.11
HOXC6-202ENST00000394331 IGLV11-55A0A075B6I3 123 aa14.35□□□□□ -0.11
HOXC6-202ENST00000394331 C11orf71Q6IPW1 123 aa14.35□□□□□ -0.11
HOXC6-202ENST00000394331 CSDC2Q9Y534 153 aaKnown RBP14.35□□□□□ -0.11
HOXC6-202ENST00000394331 PTPRQQ9UMZ3 2332 aa14.35□□□□□ -0.11
HOXC6-202ENST00000394331 OOSP1A8MZH6 123 aa14.35□□□□□ -0.11
HOXC6-202ENST00000394331 SPXQ9BT56 116 aa14.35□□□□□ -0.11
HOXC6-202ENST00000394331 CDSNQ15517 529 aa14.34□□□□□ -0.11
HOXC6-202ENST00000394331 FANCD2OSQ96PS1 177 aa14.34□□□□□ -0.11
HOXC6-202ENST00000394331 DEFB121Q5J5C9 76 aa14.34□□□□□ -0.11
HOXC6-202ENST00000394331 Q6ZS46 218 aa14.34□□□□□ -0.11
HOXC6-202ENST00000394331 TLN1Q9Y490 2541 aaKnown RBP14.34□□□□□ -0.11
HOXC6-202ENST00000394331 ANKHD1Q8IWZ3 2542 aaKnown RBP14.33□□□□□ -0.11
HOXC6-202ENST00000394331 IGLV4-69A0A075B6H9 119 aa14.33□□□□□ -0.12
HOXC6-202ENST00000394331 IGHV1-69DA0A0B4J2H0 117 aa14.33□□□□□ -0.12
HOXC6-202ENST00000394331 IMUPQ9GZP8 106 aa14.33□□□□□ -0.12
HOXC6-202ENST00000394331 TPRP12270 2363 aaKnown RBP14.33□□□□□ -0.12
HOXC6-202ENST00000394331 TEX49A0A1B0GTD5 131 aa14.33□□□□□ -0.12
HOXC6-202ENST00000394331 SCGB2A1O75556 95 aa14.33□□□□□ -0.12
HOXC6-202ENST00000394331 DYNAPQ8N1N2 210 aa14.33□□□□□ -0.12
HOXC6-202ENST00000394331 M0R381 172 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 AMELXQ99217 191 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 SPANXCQ9NY87 97 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 C21orf62Q9NYP8 219 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 SMAD5-AS1Q9Y6J3 95 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 C11orf86A6NJI1 115 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 MINOS1Q5TGZ0 78 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 KLK15Q9H2R5 256 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 MINOS1-NBL1R4GNA1 71 aa14.32□□□□□ -0.12
HOXC6-202ENST00000394331 CRYGDP07320 174 aa14.31□□□□□ -0.12
HOXC6-202ENST00000394331 VMO1Q7Z5L0 202 aa14.31□□□□□ -0.12
HOXC6-202ENST00000394331 C11orf21Q9P2W6 132 aa14.31□□□□□ -0.12
HOXC6-202ENST00000394331 TRBV30A0A0K0K1B3 111 aa14.31□□□□□ -0.12
HOXC6-202ENST00000394331 S4R3C0 116 aa14.31□□□□□ -0.12
HOXC6-202ENST00000394331 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.31□□□□□ -0.12
HOXC6-202ENST00000394331 H3BT86 120 aa14.31□□□□□ -0.12
HOXC6-202ENST00000394331 IGFBPL1Q8WX77 278 aa14.31□□□□□ -0.12
HOXC6-202ENST00000394331 EBI3Q14213 229 aa14.3□□□□□ -0.12
HOXC6-202ENST00000394331 SPANXN1Q5VSR9 72 aa14.3□□□□□ -0.12
HOXC6-202ENST00000394331 Q8N6K4 173 aa14.3□□□□□ -0.12
HOXC6-202ENST00000394331 DMXL2Q8TDJ6 3036 aa14.3□□□□□ -0.12
HOXC6-202ENST00000394331 A4D1N5 150 aa14.3□□□□□ -0.12
HOXC6-202ENST00000394331 EIF4EBP3O60516 100 aaPredicted RBP14.3□□□□□ -0.12
HOXC6-202ENST00000394331 ABCA4P78363 2273 aa14.29□□□□□ -0.12
HOXC6-202ENST00000394331 PPP1R17O96001 155 aa14.29□□□□□ -0.12
HOXC6-202ENST00000394331 LRRC75A-AS1Q8N1F1 130 aa14.29□□□□□ -0.12
HOXC6-202ENST00000394331 F8W735 103 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms