RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 LINC01619G3V211 115 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 PF4V1P10720 104 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 C12orf74Q32Q52 190 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 POM121L12Q8N7R1 296 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 OR11H1Q8NG94 326 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 OR11H2Q8NH07 326 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 BAALCQ8WXS3 180 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 HIST1H4GQ99525 98 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 RHPN1-AS1Q9BWJ2 59 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 IGKV3-7A0A075B6H7 116 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 MYMXA0A1B0GTQ4 84 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 H3BUX3 64 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 NXPH4O95158 308 aa14.19□□□□□ -0.14
CBX1-202ENST00000393408 RIPPLY3P57055 190 aa14.18□□□□□ -0.14
CBX1-202ENST00000393408 PIMREGQ9BSJ6 248 aa14.17□□□□□ -0.14
CBX1-202ENST00000393408 MUC4Q99102 2169 aa14.17□□□□□ -0.14
CBX1-202ENST00000393408 PPP1R17O96001 155 aa14.17□□□□□ -0.14
CBX1-202ENST00000393408 BLCAPP62952 87 aa14.17□□□□□ -0.14
CBX1-202ENST00000393408 Q6ZS46 218 aa14.17□□□□□ -0.14
CBX1-202ENST00000393408 LCNL1Q6ZST4 164 aa14.17□□□□□ -0.14
CBX1-202ENST00000393408 KIF25-AS1Q9Y6Z4 181 aa14.16□□□□□ -0.14
CBX1-202ENST00000393408 CHD8Q9HCK8 2581 aa14.16□□□□□ -0.14
CBX1-202ENST00000393408 IGLV1-40P01703 118 aa14.16□□□□□ -0.14
CBX1-202ENST00000393408 ZNF479Q96JC4 524 aa14.16□□□□□ -0.14
CBX1-202ENST00000393408 CELSR1Q9NYQ6 3014 aa14.16□□□□□ -0.14
CBX1-202ENST00000393408 PRSS29PA6NIE9 313 aa14.15□□□□□ -0.14
CBX1-202ENST00000393408 LINC00315P59091 139 aa14.15□□□□□ -0.14
CBX1-202ENST00000393408 DAZ1Q9NQZ3 744 aaKnown RBP14.15□□□□□ -0.14
CBX1-202ENST00000393408 KLLNB2CW77 178 aa14.15□□□□□ -0.14
CBX1-202ENST00000393408 FOXI2Q6ZQN5 318 aa14.15□□□□□ -0.14
CBX1-202ENST00000393408 C10orf105Q8TEF2 133 aa14.15□□□□□ -0.14
CBX1-202ENST00000393408 GNLYP22749 145 aa14.14□□□□□ -0.15
CBX1-202ENST00000393408 A0A1B0GWB2 263 aa14.14□□□□□ -0.15
CBX1-202ENST00000393408 LGALS1P09382 135 aaKnown RBP14.14□□□□□ -0.15
CBX1-202ENST00000393408 NCOR2Q9Y618 2525 aa14.14□□□□□ -0.15
CBX1-202ENST00000393408 IGHV4OR15-8A0A075B7B6 117 aa14.13□□□□□ -0.15
CBX1-202ENST00000393408 A0A087WW49 117 aa14.13□□□□□ -0.15
CBX1-202ENST00000393408 SRD5A1P18405 259 aa14.13□□□□□ -0.15
CBX1-202ENST00000393408 RPL32P62910 135 aaKnown RBP14.13□□□□□ -0.15
CBX1-202ENST00000393408 PRADC1Q9BSG0 188 aa14.13□□□□□ -0.15
CBX1-202ENST00000393408 SPTAN1Q13813 2472 aaKnown RBP14.13□□□□□ -0.15
CBX1-202ENST00000393408 EDN2P20800 178 aa14.13□□□□□ -0.15
CBX1-202ENST00000393408 TEX48A0A1B0GUV7 120 aa14.12□□□□□ -0.15
CBX1-202ENST00000393408 DUSP14O95147 198 aaKnown RBP14.12□□□□□ -0.15
CBX1-202ENST00000393408 RPL24P83731 157 aaKnown RBP14.12□□□□□ -0.15
CBX1-202ENST00000393408 CFHR3Q02985 330 aa14.12□□□□□ -0.15
CBX1-202ENST00000393408 RRN3P1Q2M238 152 aa14.12□□□□□ -0.15
CBX1-202ENST00000393408 CRYGDP07320 174 aa14.11□□□□□ -0.15
CBX1-202ENST00000393408 CYSLTR1Q9Y271 337 aa14.11□□□□□ -0.15
CBX1-202ENST00000393408 K7EMT4 169 aa14.11□□□□□ -0.15
CBX1-202ENST00000393408 FAM159AQ6UWV7 190 aa14.11□□□□□ -0.15
CBX1-202ENST00000393408 TSHBP01222 138 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 DCANP1Q8TF63 244 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 CCL19Q99731 98 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 JPT2Q9H910 190 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 VPS13CQ709C8 3753 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 F8W1H4 67 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 NDUFS8O00217 210 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 COX6B1P14854 86 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 ID1P41134 155 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 POLR2KP53803 58 aaKnown RBP14.1□□□□□ -0.15
CBX1-202ENST00000393408 SUMO4Q6EEV6 95 aa14.1□□□□□ -0.15
CBX1-202ENST00000393408 PRORYQ9H606 182 aa14.09□□□□□ -0.15
CBX1-202ENST00000393408 TP53TG1Q9Y2A0 90 aa14.09□□□□□ -0.15
CBX1-202ENST00000393408 IGIPA6NJ69 53 aa14.09□□□□□ -0.15
CBX1-202ENST00000393408 ZNF815PA8K554 130 aa14.09□□□□□ -0.15
CBX1-202ENST00000393408 ZFP2Q6ZN57 461 aa14.09□□□□□ -0.15
CBX1-202ENST00000393408 IGLV4-69A0A075B6H9 119 aa14.08□□□□□ -0.16
CBX1-202ENST00000393408 IGHV4-30-2A0A087WSY4 118 aa14.08□□□□□ -0.16
CBX1-202ENST00000393408 WFDC2Q14508 124 aa14.08□□□□□ -0.16
CBX1-202ENST00000393408 CLEC2AQ6UVW9 174 aa14.08□□□□□ -0.16
CBX1-202ENST00000393408 H3BMG7 143 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 MSMBP08118 114 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 WFDC12Q8WWY7 111 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 ITPR1Q14643 2758 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 LINC01549A6NIU2 74 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 C11orf86A6NJI1 115 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 SCGB2A2Q13296 93 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 SAMD13Q5VXD3 122 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 MORN3Q6PF18 240 aaPredicted RBP14.07□□□□□ -0.16
CBX1-202ENST00000393408 PLEKHB2Q96CS7 222 aa14.07□□□□□ -0.16
CBX1-202ENST00000393408 SPANXB1Q9NS25 103 aaPredicted RBP14.07□□□□□ -0.16
CBX1-202ENST00000393408 A0A087WWL8 130 aa14.06□□□□□ -0.16
CBX1-202ENST00000393408 TRAV12-3A0A0B4J271 114 aa14.06□□□□□ -0.16
CBX1-202ENST00000393408 CD7P09564 240 aa14.06□□□□□ -0.16
CBX1-202ENST00000393408 VCYO14598 125 aa14.06□□□□□ -0.16
CBX1-202ENST00000393408 AMTNQ6UX39 209 aa14.06□□□□□ -0.16
CBX1-202ENST00000393408 HOXA3O43365 443 aaPredicted RBP14.05□□□□□ -0.16
CBX1-202ENST00000393408 TMEM95Q3KNT9 176 aa14.05□□□□□ -0.16
CBX1-202ENST00000393408 CD300EQ496F6 205 aaPredicted RBP14.05□□□□□ -0.16
CBX1-202ENST00000393408 ATP5J2P56134 94 aa14.05□□□□□ -0.16
CBX1-202ENST00000393408 PMVKQ15126 192 aa14.05□□□□□ -0.16
CBX1-202ENST00000393408 PAPPA-AS1Q5QFB9 102 aa14.05□□□□□ -0.16
CBX1-202ENST00000393408 ZNF580Q9UK33 172 aa14.05□□□□□ -0.16
CBX1-202ENST00000393408 AVPP01185 164 aa14.04□□□□□ -0.16
CBX1-202ENST00000393408 RPL39P62891 51 aaKnown RBP14.04□□□□□ -0.16
CBX1-202ENST00000393408 SCGB1D4Q6XE38 83 aa14.04□□□□□ -0.16
CBX1-202ENST00000393408 KLHL30-AS1Q8NEE0 82 aa14.04□□□□□ -0.16
CBX1-202ENST00000393408 DEFB104AQ8WTQ1 72 aa14.04□□□□□ -0.16
CBX1-202ENST00000393408 TMEM141Q96I45 108 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms