RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 RNASE3P12724 160 aaKnown RBP14.94□□□□□ -0.02
PTPN11-202ENST00000392597 DEFB125Q8N687 156 aa14.94□□□□□ -0.02
PTPN11-202ENST00000392597 C14orf144Q96I85 54 aa14.94□□□□□ -0.02
PTPN11-202ENST00000392597 NXT2Q9NPJ8 142 aaKnown RBP14.94□□□□□ -0.02
PTPN11-202ENST00000392597 C20orf202A1L168 122 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 NXPH4O95158 308 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 CDKN1BP46527 198 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 FHL3Q13643 280 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 PET117Q6UWS5 81 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 LINC00173Q6ZV60 143 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 MRAP2Q96G30 205 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 DUX3Q96PT4 197 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 GNRH2O43555 120 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 HILS1P60008 231 aa14.93□□□□□ -0.02
PTPN11-202ENST00000392597 TIMM8BQ9Y5J9 83 aaPredicted RBP14.93□□□□□ -0.02
PTPN11-202ENST00000392597 A0A096LNJ9 63 aa14.92□□□□□ -0.02
PTPN11-202ENST00000392597 PRSS47A8MTI9 375 aa14.92□□□□□ -0.02
PTPN11-202ENST00000392597 LINC01006Q8NI28 216 aa14.92□□□□□ -0.02
PTPN11-202ENST00000392597 DYNLRB2Q8TF09 96 aa14.92□□□□□ -0.02
PTPN11-202ENST00000392597 RAX2Q96IS3 184 aa14.92□□□□□ -0.02
PTPN11-202ENST00000392597 NIPBLQ6KC79 2804 aaeCLIP14.92□□□□□ -0.02
PTPN11-202ENST00000392597 TRAV12-3A0A0B4J271 114 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 A8MTW9 85 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 M0R381 172 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 TMEM61Q8N0U2 210 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 OR2K2Q8NGT1 345 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 ZNF747Q9BV97 191 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 AMTNQ6UX39 209 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 SPATA12Q7Z6I5 190 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 DPH3P1Q9H4G8 78 aa14.91□□□□□ -0.02
PTPN11-202ENST00000392597 GAS8-AS1O95177 125 aa14.9□□□□□ -0.02
PTPN11-202ENST00000392597 HBDP02042 147 aa14.9□□□□□ -0.02
PTPN11-202ENST00000392597 CD28P10747 220 aa14.9□□□□□ -0.02
PTPN11-202ENST00000392597 DEFB114Q30KQ6 69 aa14.9□□□□□ -0.02
PTPN11-202ENST00000392597 SPATA45Q537H7 98 aa14.9□□□□□ -0.02
PTPN11-202ENST00000392597 NRACQ8N912 160 aa14.9□□□□□ -0.02
PTPN11-202ENST00000392597 MIEN1Q9BRT3 115 aa14.9□□□□□ -0.02
PTPN11-202ENST00000392597 TSSC4Q9Y5U2 329 aaPredicted RBP14.9□□□□□ -0.02
PTPN11-202ENST00000392597 TRAV9-2A0A087WT02 112 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 AP1S3Q96PC3 154 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 SORL1Q92673 2214 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 NDUFA7O95182 113 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 IGKV3-20P01619 116 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 HLA-DRB4P13762 266 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 Q8N8P6 123 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 HLA-DRB4X5D2U9 266 aa14.89□□□□□ -0.03
PTPN11-202ENST00000392597 TRAV25A0A0B4J276 109 aa14.88□□□□□ -0.03
PTPN11-202ENST00000392597 CCL24O00175 119 aa14.88□□□□□ -0.03
PTPN11-202ENST00000392597 CD7P09564 240 aa14.88□□□□□ -0.03
PTPN11-202ENST00000392597 GATA1P15976 413 aaPredicted RBP14.88□□□□□ -0.03
PTPN11-202ENST00000392597 DEFB131AP59861 70 aa14.88□□□□□ -0.03
PTPN11-202ENST00000392597 JMJD8Q96S16 334 aa14.88□□□□□ -0.03
PTPN11-202ENST00000392597 OR4C46A6NHA9 309 aa14.87□□□□□ -0.03
PTPN11-202ENST00000392597 SPINK13Q1W4C9 94 aa14.87□□□□□ -0.03
PTPN11-202ENST00000392597 LINC01545Q5VT33 79 aa14.87□□□□□ -0.03
PTPN11-202ENST00000392597 ZNF705AQ6ZN79 300 aaPredicted RBP14.87□□□□□ -0.03
PTPN11-202ENST00000392597 SPAG8Q99932 426 aaPredicted RBP14.87□□□□□ -0.03
PTPN11-202ENST00000392597 AGRNO00468 2067 aa14.87□□□□□ -0.03
PTPN11-202ENST00000392597 IGLV2-18A0A075B6J9 118 aa14.86□□□□□ -0.03
PTPN11-202ENST00000392597 TRAV12-2A0A075B6T6 113 aa14.86□□□□□ -0.03
PTPN11-202ENST00000392597 IGHV1OR15-1A0A075B7D0 117 aa14.86□□□□□ -0.03
PTPN11-202ENST00000392597 ATOH7Q8N100 152 aa14.86□□□□□ -0.03
PTPN11-202ENST00000392597 POM121L12Q8N7R1 296 aa14.86□□□□□ -0.03
PTPN11-202ENST00000392597 CITED2Q99967 270 aaPredicted RBP14.86□□□□□ -0.03
PTPN11-202ENST00000392597 JMJD1CQ15652 2540 aa14.85□□□□□ -0.03
PTPN11-202ENST00000392597 MUC4Q99102 2169 aa14.85□□□□□ -0.03
PTPN11-202ENST00000392597 IGHV3-16A0A0C4DH30 117 aa14.85□□□□□ -0.03
PTPN11-202ENST00000392597 H3BMM0 161 aa14.85□□□□□ -0.03
PTPN11-202ENST00000392597 C14orf178Q8N769 122 aaPredicted RBP14.85□□□□□ -0.03
PTPN11-202ENST00000392597 C9orf85Q96MD7 179 aa14.85□□□□□ -0.03
PTPN11-202ENST00000392597 TRAV26-2A0A0B4J265 109 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 KNCNA6PVL3 124 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 FCER1GP30273 86 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 CD300EQ496F6 205 aaPredicted RBP14.84□□□□□ -0.03
PTPN11-202ENST00000392597 C11orf44Q8N8P7 122 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 A0A1W2PRX2 142 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 SPRY2O43597 315 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 PPP1R17O96001 155 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 MAP6D1Q9H9H5 199 aa14.84□□□□□ -0.03
PTPN11-202ENST00000392597 IGLC3P0DOY3 106 aa14.83□□□□□ -0.04
PTPN11-202ENST00000392597 LBHQ53QV2 105 aaPredicted RBP14.83□□□□□ -0.04
PTPN11-202ENST00000392597 HIST2H2BDQ6DRA6 164 aa14.83□□□□□ -0.04
PTPN11-202ENST00000392597 MRPL52Q86TS9 123 aaKnown RBP14.83□□□□□ -0.04
PTPN11-202ENST00000392597 C20orf78Q9BR46 151 aa14.83□□□□□ -0.04
PTPN11-202ENST00000392597 UQCR10Q9UDW1 63 aa14.83□□□□□ -0.04
PTPN11-202ENST00000392597 ZNF256Q9Y2P7 627 aaPredicted RBP14.83□□□□□ -0.04
PTPN11-202ENST00000392597 Q8N1Y9 231 aa14.82□□□□□ -0.04
PTPN11-202ENST00000392597 KIF25-AS1Q9Y6Z4 181 aa14.82□□□□□ -0.04
PTPN11-202ENST00000392597 SETD2Q9BYW2 2564 aaPredicted RBP14.82□□□□□ -0.04
PTPN11-202ENST00000392597 CLUHP3Q96NS8 147 aa14.82□□□□□ -0.04
PTPN11-202ENST00000392597 TRGV11A0A075B6L2 103 aa14.81□□□□□ -0.04
PTPN11-202ENST00000392597 SMIM17P0DL12 118 aa14.81□□□□□ -0.04
PTPN11-202ENST00000392597 MAJINQ3KP22 176 aa14.81□□□□□ -0.04
PTPN11-202ENST00000392597 SYT8Q8NBV8 401 aa14.81□□□□□ -0.04
PTPN11-202ENST00000392597 RASL10AQ92737 203 aa14.81□□□□□ -0.04
PTPN11-202ENST00000392597 IFI27L1Q96BM0 104 aa14.81□□□□□ -0.04
PTPN11-202ENST00000392597 ST20Q9HBF5 79 aa14.81□□□□□ -0.04
PTPN11-202ENST00000392597 IGLL1P15814 213 aa14.8□□□□□ -0.04
PTPN11-202ENST00000392597 SMIM2Q9BVW6 85 aa14.8□□□□□ -0.04
PTPN11-202ENST00000392597 K7EMI3 77 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms