RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 Q6ZSN1 163 aa11.13□□□□□ -0.63
PTPRK-208ENST00000392449 Q9HAA7 133 aa11.13□□□□□ -0.63
PTPRK-208ENST00000392449 TMEM167BQ9NRX6 74 aa11.13□□□□□ -0.63
PTPRK-208ENST00000392449 FXYD6-FXYD2A0A087WZ82 144 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 EPM2AB3EWF7 344 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 K7EP13 123 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 IGHV3-30P01768 117 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 IGHV3-33P01772 117 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 IGHV3-30-3P0DP02 117 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 IGHV3-30-5P0DP03 117 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 TIRAPP58753 221 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 RHOHQ15669 191 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 ZFP69Q49AA0 526 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 OR10J3Q5JRS4 329 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 SH2D6Q7Z4S9 175 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 Q8N3U1 123 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 C10orf126Q8N4M7 172 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 TNFSF18Q9UNG2 199 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 IGKV3D-20A0A0C4DH25 116 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 GIPP09681 153 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-208ENST00000392449 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-208ENST00000392449 LINC01556Q5JQF7 62 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 PRADC1Q9BSG0 188 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 Q9UF83 564 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 ARL2-SNX15V9GYD0 113 aa11.12□□□□□ -0.63
PTPRK-208ENST00000392449 TRBV6-4A0A1B0GX49 114 aa11.11□□□□□ -0.63
PTPRK-208ENST00000392449 LRCOL1A6NCL2 159 aa11.11□□□□□ -0.63
PTPRK-208ENST00000392449 INO80EQ8NBZ0 244 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-208ENST00000392449 JPT2Q9H910 190 aa11.11□□□□□ -0.63
PTPRK-208ENST00000392449 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
PTPRK-208ENST00000392449 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
PTPRK-208ENST00000392449 PSCAO43653 123 aa11.1□□□□□ -0.63
PTPRK-208ENST00000392449 IFNA7P01567 189 aa11.1□□□□□ -0.63
PTPRK-208ENST00000392449 A0A1W2PRE2 83 aa11.09□□□□□ -0.63
PTPRK-208ENST00000392449 IBA57-AS1B1ANH7 110 aa11.09□□□□□ -0.63
PTPRK-208ENST00000392449 SMR3BP02814 79 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-208ENST00000392449 GCSHP23434 173 aa11.09□□□□□ -0.63
PTPRK-208ENST00000392449 SAPCD1Q5SSQ6 148 aa11.09□□□□□ -0.63
PTPRK-208ENST00000392449 Q86TA4 180 aa11.09□□□□□ -0.63
PTPRK-208ENST00000392449 PARLQ9H300 379 aa11.09□□□□□ -0.63
PTPRK-208ENST00000392449 BORCS7-ASMTA0A0B4J1R7 106 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 GAGE12JA6NER3 117 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 G3V3Q6 166 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 PEX7O00628 323 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 MGST1P10620 155 aaKnown RBP11.08□□□□□ -0.64
PTPRK-208ENST00000392449 GAGE1Q13065 139 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 GAGE4Q13068 117 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 GAGE5Q13069 117 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 GAGE13Q4V321 117 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 LELP1Q5T871 98 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 Q5VSD8 79 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 OR2T35Q8NGX2 323 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 ATP6V0E2Q8NHE4 81 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 PTH2Q96A98 100 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 SAMD10Q9BYL1 202 aa11.08□□□□□ -0.64
PTPRK-208ENST00000392449 FAM74A7A6NL05 159 aa11.07□□□□□ -0.64
PTPRK-208ENST00000392449 H3BVH4 76 aa11.07□□□□□ -0.64
PTPRK-208ENST00000392449 S100A4P26447 101 aaKnown RBP11.07□□□□□ -0.64
PTPRK-208ENST00000392449 LGALSLQ3ZCW2 172 aaPredicted RBP11.07□□□□□ -0.64
PTPRK-208ENST00000392449 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
PTPRK-208ENST00000392449 HERC1Q15751 4861 aa11.07□□□□□ -0.64
PTPRK-208ENST00000392449 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
PTPRK-208ENST00000392449 IGLV5-52A0A0A0MRZ9 124 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 M0R036 132 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 CIDEAO60543 219 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 ASIPP42127 132 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 CRIP1P50238 77 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 C14orf178Q8N769 122 aaPredicted RBP11.06□□□□□ -0.64
PTPRK-208ENST00000392449 ZC2HC1AQ96GY0 325 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 GRIFINA4D1Z8 144 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 FABP5P3A8MUU1 101 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 B4DEV8 164 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 WFDC2Q14508 124 aa11.06□□□□□ -0.64
PTPRK-208ENST00000392449 INAFM2P0DMQ5 153 aa11.05□□□□□ -0.64
PTPRK-208ENST00000392449 AKR1C8PQ5T2L2 129 aa11.05□□□□□ -0.64
PTPRK-208ENST00000392449 UFSP1Q6NVU6 142 aa11.05□□□□□ -0.64
PTPRK-208ENST00000392449 Q8N814 137 aa11.05□□□□□ -0.64
PTPRK-208ENST00000392449 A8MWV9 139 aa11.04□□□□□ -0.64
PTPRK-208ENST00000392449 SMLR1H3BR10 107 aa11.04□□□□□ -0.64
PTPRK-208ENST00000392449 ARPC5O15511 151 aa11.04□□□□□ -0.64
PTPRK-208ENST00000392449 SH2D1AO60880 128 aa11.04□□□□□ -0.64
PTPRK-208ENST00000392449 CYTL1Q9NRR1 136 aa11.04□□□□□ -0.64
PTPRK-208ENST00000392449 TMSB15BA0A087X1C1 80 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 MAP1LC3B2A6NCE7 125 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 KRBOX1C9JBD0 128 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 FHITP49789 147 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 ZFP2Q6ZN57 461 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 DAZ4Q86SG3 579 aaKnown RBP11.03□□□□□ -0.64
PTPRK-208ENST00000392449 FRZBQ92765 325 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 MAP1LC3BQ9GZQ8 125 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 DAZ3Q9NR90 486 aaKnown RBP11.03□□□□□ -0.64
PTPRK-208ENST00000392449 IL36BQ9NZH7 164 aa11.03□□□□□ -0.64
PTPRK-208ENST00000392449 LECT2O14960 151 aa11.02□□□□□ -0.65
PTPRK-208ENST00000392449 FAM74A4Q5TZK3 123 aa11.02□□□□□ -0.65
PTPRK-208ENST00000392449 FAM30AQ9NZY2 134 aa11.02□□□□□ -0.65
PTPRK-208ENST00000392449 MYCBP2O75592 4640 aa11.01□□□□□ -0.65
PTPRK-208ENST00000392449 SRRM2Q9UQ35 2752 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms