RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 UFSP1Q6NVU6 142 aa10.5□□□□□ -0.73
NEK4-202ENST00000383721 GTSCR1Q86UQ5 136 aa10.5□□□□□ -0.73
NEK4-202ENST00000383721 SMPXQ9UHP9 88 aa10.5□□□□□ -0.73
NEK4-202ENST00000383721 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 SPRY2O43597 315 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 OCIAD2Q56VL3 154 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 ZC2HC1BQ5TFG8 222 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 NDUFA4O00483 81 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 RNF151Q2KHN1 245 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 LINC00477Q96M19 166 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 AP1S3Q96PC3 154 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
NEK4-202ENST00000383721 MRPL35Q9NZE8 188 aaKnown RBP10.49□□□□□ -0.73
NEK4-202ENST00000383721 A0A0G2JLM5 398 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 MYOZ3Q8TDC0 251 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 RAB37Q96AX2 223 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 TMEM160Q9NX00 188 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 HIGD1BQ9P298 99 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.48□□□□□ -0.732e-7■■■■□ 21.8
NEK4-202ENST00000383721 IGHV4-31P0DP07 118 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 IGHV4-38-2P0DP08 117 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 LY6EQ16553 131 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 KLK15Q9H2R5 256 aa10.48□□□□□ -0.73
NEK4-202ENST00000383721 IGHV3-11P01762 117 aa10.47□□□□□ -0.73
NEK4-202ENST00000383721 OR10J6PQ8NGY7 276 aa10.47□□□□□ -0.73
NEK4-202ENST00000383721 M0R381 172 aa10.47□□□□□ -0.73
NEK4-202ENST00000383721 OVOL1O14753 267 aa10.47□□□□□ -0.73
NEK4-202ENST00000383721 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
NEK4-202ENST00000383721 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
NEK4-202ENST00000383721 TRBV25-1A0A075B6N4 114 aa10.46□□□□□ -0.73
NEK4-202ENST00000383721 TRAV21A0A0B4J279 112 aa10.46□□□□□ -0.73
NEK4-202ENST00000383721 MSMBP08118 114 aa10.46□□□□□ -0.73
NEK4-202ENST00000383721 FXYD2P54710 66 aa10.46□□□□□ -0.73
NEK4-202ENST00000383721 SMR3AQ99954 134 aa10.46□□□□□ -0.73
NEK4-202ENST00000383721 CHAC1Q9BUX1 264 aa10.46□□□□□ -0.73
NEK4-202ENST00000383721 A0A087WX48 190 aa10.46□□□□□ -0.74
NEK4-202ENST00000383721 B4DSR2 109 aa10.46□□□□□ -0.74
NEK4-202ENST00000383721 F6UB75 175 aa10.46□□□□□ -0.74
NEK4-202ENST00000383721 K7EP34 96 aa10.46□□□□□ -0.74
NEK4-202ENST00000383721 IGHG2P01859 326 aa10.46□□□□□ -0.74
NEK4-202ENST00000383721 GCSHP23434 173 aa10.46□□□□□ -0.74
NEK4-202ENST00000383721 GTF2H5Q6ZYL4 71 aa10.46□□□□□ -0.74
NEK4-202ENST00000383721 TGFAP01135 160 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 ANXA2RQ3ZCQ2 193 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 RASL10AQ92737 203 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 USMG5Q96IX5 58 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 H3BUX3 64 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 BRI3O95415 125 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 BLCAPP62952 87 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 Q6ZS46 218 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 LCNL1Q6ZST4 164 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 LINC01356Q8N9X3 169 aa10.45□□□□□ -0.74
NEK4-202ENST00000383721 SONP18583 2426 aaKnown RBP10.45□□□□□ -0.74
NEK4-202ENST00000383721 A6NDX4 124 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 S100A4P26447 101 aaKnown RBP10.44□□□□□ -0.74
NEK4-202ENST00000383721 RPL11P62913 178 aaKnown RBP10.44□□□□□ -0.74
NEK4-202ENST00000383721 C14orf178Q8N769 122 aaPredicted RBP10.44□□□□□ -0.74
NEK4-202ENST00000383721 MAPKAPK5-AS1Q8N8E1 139 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 IGKV3-7A0A075B6H7 116 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 A0A1W2PPM0 123 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 H3BUA1 57 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 PF4V1P10720 104 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 HLA-DRB4P13762 266 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
NEK4-202ENST00000383721 ASIPP42127 132 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 SUMO2P61956 95 aaKnown RBP10.44□□□□□ -0.74
NEK4-202ENST00000383721 KRTAP1-1Q07627 177 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 RPL39LQ96EH5 51 aaKnown RBP10.44□□□□□ -0.74
NEK4-202ENST00000383721 HLA-DRB4X5D2U9 266 aa10.44□□□□□ -0.74
NEK4-202ENST00000383721 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.43□□□□□ -0.74
NEK4-202ENST00000383721 DPH3P1Q9H4G8 78 aa10.43□□□□□ -0.74
NEK4-202ENST00000383721 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
NEK4-202ENST00000383721 GNRH2O43555 120 aa10.43□□□□□ -0.74
NEK4-202ENST00000383721 SMIM13P0DJ93 91 aa10.43□□□□□ -0.74
NEK4-202ENST00000383721 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
NEK4-202ENST00000383721 RHPN1-AS1Q9BWJ2 59 aa10.43□□□□□ -0.74
NEK4-202ENST00000383721 MXRA5Q9NR99 2828 aa10.43□□□□□ -0.74
NEK4-202ENST00000383721 AVPP01185 164 aa10.42□□□□□ -0.74
NEK4-202ENST00000383721 C20orf78Q9BR46 151 aa10.42□□□□□ -0.74
NEK4-202ENST00000383721 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
NEK4-202ENST00000383721 PLNP26678 52 aa10.42□□□□□ -0.74
NEK4-202ENST00000383721 ORMDL2Q53FV1 153 aa10.42□□□□□ -0.74
NEK4-202ENST00000383721 F8P00451 2351 aa10.42□□□□□ -0.74
NEK4-202ENST00000383721 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 K7ERJ3 54 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 TM2D2Q9BX73 214 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 SPCS1Q9Y6A9 102 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 F8VRH5 84 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 H7C1H1 209 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 SAP30O75446 220 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 IGLV1-40P01703 118 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 EDN2P20800 178 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 CEND1Q8N111 149 aa10.41□□□□□ -0.74
NEK4-202ENST00000383721 PHLDA1Q8WV24 401 aaPredicted RBP10.41□□□□□ -0.74
NEK4-202ENST00000383721 SCGB3A1Q96QR1 104 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms